prot_H-paniculata_contig21716.5739.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21716.5739.1
Unique Nameprot_H-paniculata_contig21716.5739.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length854
Homology
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BLAST of mRNA_H-paniculata_contig21716.5739.1 vs. uniprot
Match: A0A6H5JJY8_9PHAE (DUF2013 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY8_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.910e-11
Identity = 54/141 (38.30%), Postives = 66/141 (46.81%), Query Frame = 0 
Query:  704 VSRAATRVCRLWELVGSTGEKEAWATLARGESHRVCRRLVDYATVA-------------------DGVRLSPVAVVGVDCRRDGTRLCHSAFGCLALFGRISPGMWTDLAVLLPEQSVRDGDLGKPLTSRQTRLTRLLSLC 825
            ++ A+ RV RL EL+ S GE +AW+ L   + H  CRRL D A                           SP    GVD RR    LC  A  CLA+ G+ISPGMW DL+   P+QS   G          +RL RLLSLC
Sbjct:  820 LNNASRRVSRLRELLDSVGEADAWSRLLSADGHLGCRRLADLALAGHSAAAXXXXXXXXXXXAGPQAATASPAPAPGVDTRRCRL-LCAGALECLAISGKISPGMWADLSK--PDQSEEYG-------GESSRLARLLSLC 950
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BLAST of mRNA_H-paniculata_contig21716.5739.1 vs. uniprot
Match: D7G065_ECTSI (DUF2013 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G065_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.690e-10
Identity = 53/139 (38.13%), Postives = 64/139 (46.04%), Query Frame = 0 
Query:  704 VSRAATRVCRLWELVGSTGEKEAWATLARGESHRVCRRLVDYATVADGVRLSPVAVV-----------------GVDCRRDGTRLCHSAFGCLALFGRISPGMWTDLAVLLPEQSVRDGDLGKPLTSRQTRLTRLLSLC 825
            +S A+ RV RL EL+GS GE +AW+ L   + H  CRRL   A                               GVD RR    LC  A  CLA+ G+ISPGMW DL+   P+QS  +G           RL RLLSLC
Sbjct:  583 LSNASRRVSRLRELLGSVGEADAWSRLLSADGHLGCRRLAGLAFAGYSAAXXXXXXXXXXXXXXXXXXXXXXXXGVDTRRCRL-LCAGALECLAICGKISPGMWADLSK--PDQSEENG-------GESNRLARLLSLC 711
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21716.5739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJY8_9PHAE1.910e-1138.30DUF2013 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G065_ECTSI2.690e-1038.13DUF2013 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21716contigH-paniculata_contig21716:709..4097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21716.5739.1mRNA_H-paniculata_contig21716.5739.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21716 707..4097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21716.5739.1 ID=prot_H-paniculata_contig21716.5739.1|Name=mRNA_H-paniculata_contig21716.5739.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=854bp
QFDQHSDSHNYRYNYRYNAKLGGEIEAREGDLQSGGGSSGGSLLPEAQVS
IQLLPNAAAATPAIAPAIPGPLAPSHRPVSASPPPAEREGATLQNALTRK
QESFRRLEKAKEAAAQARVAAAAEAEKRRVARAAAKVAAKAEAAATATGA
KRTAMAGPVDCDVGKGVEEDGSGVRGRLEKPMGVGGVEGAATAAAEFHMM
SSSRPQDTAPSCSPPIPSPVPPLMDLLPEWDGRNDGDLTTSMMPNGDSAA
ESLSVSAVDRQGFELDCFGVGGVSGVEKAPSTVETDGESVVVSAAVVFSC
EPSDAEDTREIGASPTFSNGMGRQQPTNGITAKVVEGTAASELCSPPLLY
GTRQLDDDDDGWESNEEAVIGQNVGMTEEDALSSPNVITPGEWVHPPSVL
PTPPLPCDLSAVAVLPESAEVDDAMVGGVDVDEDSSRNENGMVEVEVGWE
QVALFGPEANEEVAQLLVTLGAISSGKPHNDLTPPPPPPPATAAAIEISV
ADREEPNGKTHADDNRVGNVVGTEGKNDFPVDNAAADIPRKKEANIGVVS
GDHTLVKGGAIDLCFGSVGSDDVSPSSEIPLCEGEPVEQSGEQCEEQSRE
RKRNDSGGEELRVADDRSVGSGTDGDWIKISPPVVAAAALNTEAFFACAT
GAAATAAATNSDSEASPEETAPLDMAVAIQDKKGGISFYPESDGTSLTSL
TSLVSRAATRVCRLWELVGSTGEKEAWATLARGESHRVCRRLVDYATVAD
GVRLSPVAVVGVDCRRDGTRLCHSAFGCLALFGRISPGMWTDLAVLLPEQ
SVRDGDLGKPLTSRQTRLTRLLSLCCTAMVKEGQADREVSTRADEGDDSD
ELAG
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