mRNA_H-paniculata_contig2161.5702.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: D8LI64_ECTSI (Catalytic, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI64_ECTSI) HSP 1 Score: 303 bits (775), Expect = 2.120e-94 Identity = 150/224 (66.96%), Postives = 177/224 (79.02%), Query Frame = 3
Query: 162 QSMAGDAVAEGESRKAVGVVLRSSAKTVHFIRHAEGTHNKAAKEEGREAYDKEEHFDARLTDFGNEQCAALKATGHGIEKEAQLVVVSPLTRAIETAIRTVDQVDGVPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASLNE-RETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAILSPPHIAKWFENCELRTVLLDV 830
++MA ++G K VGVV RS AKTVHFIRHAEGTHN+AA +EGR AY K EH DARLTD G +QCA LKAT HGIEKEAQLVVVSPL RAI+TA T+DQV+GVPW+ALECVRER+G HPCDRRR + ELK E+PNI FDAI+D+ DV++ SL E RE N+ + RG EL W+ RPETNI VVTHSA+LLCLFN A+ + P AKWFENCELR+V L++
Sbjct: 5 ETMAETKTSDGH--KVVGVVQRSKAKTVHFIRHAEGTHNEAALKEGRAAYAKIEHLDARLTDLGKQQCATLKATKHGIEKEAQLVVVSPLARAIQTATLTIDQVEGVPWVALECVRERAGAHPCDRRRCVSELKGEYPNISFDAIKDEKDVYFDSLGEEREPNDLMADRGRELFSWLKDRPETNIVVVTHSAFLLCLFNEAMQAAPETAKWFENCELRSVFLEL 226
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: D8LI65_ECTSI (Catalytic, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI65_ECTSI) HSP 1 Score: 289 bits (740), Expect = 3.090e-89 Identity = 142/210 (67.62%), Postives = 168/210 (80.00%), Query Frame = 3
Query: 204 KAVGVVLRSSAKTVHFIRHAEGTHNKAAKEEGREAYDKEEHFDARLTDFGNEQCAALKATGHGIEKEAQLVVVSPLTRAIETAIRTVDQVDGVPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASL-NERETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAILSPPHIAKWFENCELRTVLLDV 830
K VGVV RS+AKTVHF+RHAEGTHN+AA +EGR A+ K EH DARLTD G EQCA LKA HGIEKEA+LVVVSPLTRAIETA+ +DQV+GVPW+ALECVRER+G PCDRRR + ELK+E+PNI FDAI DD D ++ S +ERET +++ RG EL W+ RPETNI VVTHS +LL LF +LSPP AK F+NCELR+VLLD+
Sbjct: 17 KVVGVVQRSTAKTVHFLRHAEGTHNEAALKEGRAAFSKIEHLDARLTDLGKEQCATLKAANHGIEKEAELVVVSPLTRAIETAMLAIDQVEGVPWVALECVRERAGVQPCDRRRCVSELKMEYPNISFDAITDDDDAYFDSQGDERETYDSMAHRGRELFSWLRDRPETNIVVVTHSGFLLSLFKRVMLSPPDTAKDFKNCELRSVLLDL 226
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: A0A835YRM9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM9_9STRA) HSP 1 Score: 226 bits (575), Expect = 4.180e-65 Identity = 115/229 (50.22%), Postives = 156/229 (68.12%), Query Frame = 3
Query: 153 SRVQSMAGDAVAEG-ESRKAVGVVLRSSAKTVHFIRHAEGTHNKAAKEEGREAYDKEEHFDARLTDFGNEQCAALKATGHGIEKEAQLVVVSPLTRAIETAIRTVDQVDG-VPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASL-NERETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAILSPPHIAKWFENCELRTVLLDV 830
S + A A ++G SR+ V V R T+HF+RHA+ THN+AA++ GREAY DARLTD G EQC L+ +E QL+VVSP++RAI+TA+ D+V VPWIALEC+RERSGNH CD+RR+ EL ++P ID+ +E D+DV+W +L ++RET+E + R H L +WI SR ETNIA+VTHSA+L LFN A+ + +WF+N ELRTVL+ +
Sbjct: 3 SATEPSAIGAASDGVNSRRTVAAVERGQTVTLHFVRHAQATHNEAAEKRGREAYSDPAFMDARLTDLGREQCRTLQGRVVSNCEEVQLMVVSPMSRAIDTAMIAFDKVPSHVPWIALECIRERSGNHACDKRRTKTELLQQYPQIDWSKVESDSDVYWDTLGDDRETDEMMEDRAHALFDWIRSRSETNIAIVTHSAFLSVLFNKAVRCGARLQRWFDNAELRTVLMQL 231
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: A0A836CMC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC3_9STRA) HSP 1 Score: 218 bits (556), Expect = 2.630e-62 Identity = 112/213 (52.58%), Postives = 145/213 (68.08%), Query Frame = 3
Query: 198 SRKAVGVVLRSSAKTVHFIRHAEGTHNKAAKEEGREAYDKEEHFDARLTDFGNEQCAALKATGHGIEKEAQLVVVSPLTRAIETAIRTVDQVDG-VPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASLNE-RETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAILSPPHIAKWFENCELRTVLLDV 830
S++ + V R +A T+HFIRHA+ THN AA++ GR AY H DARLTD G EQ L AT E QL+VVSP++RA+ETA +QV +PW+ALEC RER+GNHPCD+RR+ ELK FP+ID+ IE D+D W +L E RET+ + AR H+L EWI +RPETNIA+VTHSAYL LFN A+ + WF N E+R+ L+ +
Sbjct: 24 SKRTLVAVERRNAVTLHFIRHAQATHNAAAEKVGRAAYYDWAHLDARLTDLGREQAQGLGATLGTTIDEIQLMVVSPMSRALETASIAFEQVPSHIPWVALECARERAGNHPCDKRRTRTELKEHFPHIDWSLIESDSDALWDTLGEDRETDGMMVARAHDLFEWIRARPETNIAIVTHSAYLSVLFNKAVRCGEGLQTWFNNAEMRSTLMQL 236
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: A0A7S4JBS8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JBS8_9STRA) HSP 1 Score: 202 bits (513), Expect = 4.600e-56 Identity = 106/218 (48.62%), Postives = 140/218 (64.22%), Query Frame = 3
Query: 177 DAVAEGESRKAVGVVLRSSAKTVHFIRHAEGTHNKAAKEEGREAYDKEEHFDARLTDFGNEQC-AALKATGHGIEKEAQLVVVSPLTRAIETAIRTV--DQVDGVPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASL--NERETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAILSPPHIAKWFENCELRT 815
+ VA G +A G VL S +TVHF+RHA+ THN AAKEEGR AY H DARLT+ G +QC L+ + E LV+VSP TRA +TA+R D + V W ALEC+RE+SG HPCD RR++ +LK EFP I++ +EDD DV+ ERET+E + AR + L ++ RPE N+ VVTHSA+L LFN + + +W+ENCE+RT
Sbjct: 12 ERVANGPRWEA-GAVLASKIRTVHFVRHAQATHNLAAKEEGRIAYMDPTHHDARLTEGGMKQCDGRLREHAKSVAGEVDLVLVSPCTRATDTALRGFGGDVSESVKWYALECLREKSGQHPCDGRRAVSQLKAEFPKINYSLMEDDEDVYGEKTLGEERETDEMVAARARQFLAFLDGRPERNVVVVTHSAFLCVLFNRVVTCGSDLRRWYENCEMRT 228
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: A0A7S2Y325_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y325_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.460e-54 Identity = 110/225 (48.89%), Postives = 136/225 (60.44%), Query Frame = 3
Query: 177 DAVAEGESRKAVGVVLRSSAKTVHFIRHAEGTHNKAAKEEGREAYDKEEHFDARLTDFGNEQCA----ALKATGHGIEKEAQLVVVSPLTRAIETAIRTVDQVDGVPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASLNERETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAILSPPHIAKWFENCELRTVLLDV*ST 839
D G+ V + + KTVHFIRHAEGTHN+A+ GR Y DARLT+ G QC A K H K QLV+VSPLTR +ETA VD+V GVPW+ALEC+RER +PCDRRRSI + EFP +DF + E D W RE+NE L ARG E L+W+ +R ETN+ VVTHSA+L FN + + +WF NCE+R+VLL ST
Sbjct: 42 DGPLAGDEEHVVVAIPTGNYKTVHFIRHAEGTHNQASALYGRTEYQNWRWEDARLTEHGKRQCREANEAEKLNHH--LKGHQLVLVSPLTRCLETAELVVDKVAGVPWVALECIRERLHGNPCDRRRSINVVAKEFPYVDFSSFEVKPDKLWQE-GPRESNEELAARGREFLKWLEAREETNVVVVTHSAFLDITFNQVLKCDVAMKRWFNNCEIRSVLLSFPST 263
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: A0A6V1S4P3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S4P3_HETAK) HSP 1 Score: 190 bits (483), Expect = 1.540e-51 Identity = 100/210 (47.62%), Postives = 132/210 (62.86%), Query Frame = 3
Query: 228 SSAKTVHFIRHAEGTHN-KAAKEEGREAYDKEEHFDARLTDFGNEQCAALKAT--------GHGIEKEAQLVVVSPLTRAIETAIRTVDQVDG-VPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASLNERETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAILSPPHIAKWFENCELRTVLLD 827
+S KTVHF+RHA+ HN K K + R+AY DA LT G EQCA KA G+G +LVVVSPL R ++TA Q G VPW+ALE VRER+G+HPCDRRR + + EFP++DF ++D+ DV W RE++E + R LL++++ RPE NI VVTHSA+LLC FN ++ P + +WF NCE R+V LD
Sbjct: 30 TSCKTVHFVRHAQALHNEKFNKTKDRKAYQDPRFEDAELTALGKEQCATAKAEWASARGRHGYG---PPELVVVSPLRRCLQTATLAFGQYAGQVPWVALEEVRERNGHHPCDRRRPLAHARKEFPHVDFSLVKDEEDVTWGDGRWRESDEEMAVRSAALLKFLAGRPERNIIVVTHSAFLLCTFNKVVVCEPELRRWFANCERRSVALD 236
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: A0A4D9DAJ2_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAJ2_9STRA) HSP 1 Score: 164 bits (416), Expect = 3.860e-42 Identity = 91/197 (46.19%), Postives = 115/197 (58.38%), Query Frame = 3
Query: 237 KTVHFIRHAEGTHNKAAKEEGREAYDKEEHFDARLTDFGNEQCAALKATGHGIEKEAQLVVVSPLTRAIETAIRTVDQVDGVPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASLNERETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAI-LSPPHIAKWFENCELRTVLL 824
KTV+F+RHAE HN+A K GR AY D LT G QC ALK + I+ LVV+SPL RA+ TA D V WIALE VRER G + CD+RR L+ E+P++DF+ I ++ D W + RET + RG E L W+ RPE I VVTHSA+L LF + P +++WFEN ELR V L
Sbjct: 77 KTVYFVRHAEALHNEAFKVRGRAAYADPSFLDPELTKLGVSQCLALKPSVEAIQSSIDLVVISPLRRALMTAALAFDHRKEVSWIALETVRERIGKNACDKRRRRGVLEAEYPDVDFEKIGEE-DTRWTE-HHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRWFENAELRAVYL 271
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: UPI001FB16AF4 (phosphoglycerate mutase-like protein 1 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB16AF4) HSP 1 Score: 149 bits (377), Expect = 4.230e-37 Identity = 92/229 (40.17%), Postives = 128/229 (55.90%), Query Frame = 3
Query: 237 KTVHFIRHAEGTHNKAAKEEGREAYDKEEHFDARLTDFGNEQCAALKATGH--GIEKEAQLVVVSPLTRAIETAI-------------------------RTVDQVDGVPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASLNERETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAILSPPH------IAKWFENCELRTVLL 824
KT+H +RHA+G HN A ++E AY EE FDA+LTD G +Q L+ H GI+++ +LV+VSPL R ++TA+ + +D P++A+E RER G HPCDRRRSI E + FP IDF IE D D+ W + RE NE + RG + L W+ +R E IAVVTHS L+ A + H I+K F+NCELR++++
Sbjct: 17 KTIHLVRHAQGFHNVAGEKE-HSAYMSEEFFDAKLTDLGWQQVDNLRKHVHSSGIDQKVELVIVSPLLRTLQTAVGVFGGGYTNETEDLLMVENALDSNRAAISSLDCPPFLAVELCRERLGVHPCDRRRSINEYRPVFPGIDFSQIESDADIMWKP-DIREKNEDVGIRGMQFLNWLWTRKEREIAVVTHSGLLINTMT-AFANDCHPSMKIEISKPFKNCELRSLVM 242
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Match: A0A482S1J1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1J1_9ARCH) HSP 1 Score: 149 bits (375), Expect = 8.580e-37 Identity = 77/205 (37.56%), Postives = 118/205 (57.56%), Query Frame = 3
Query: 222 LRSSAKTVHFIRHAEGTHNKAAKEEGREAYDKEEHFDARLTDFGNEQCAALKATGHGIEKEAQLVVVSPLTRAIETAIRTVDQVDG-VPWIALECVRERSGNHPCDRRRSIQELKLEFPNIDFDAIEDDTDVHWASLNERETNEALTARGHELLEWISSRPETNIAVVTHSAYLLCLFNNAI---LSPPHIAKWFENCELRTVLL 824
L K VHF+RHAEG HN AA+ + Y + + DA +T+ G +QC L + +QL+VVSP++R ++TA + + +PW+++EC+RER+G HPCD+RR++ K ++ +DFD I + D + RE E + AR E L+W++SR E I VV+HS +L L N + L F NCE++T +L
Sbjct: 40 LHHHEKIVHFVRHAEGHHNVAARNDPLRGYLRNDLEDAHITEEGLKQCQELSEKMKHVTAHSQLLVVSPMSRTLQTASHSFPHLQHKIPWVSIECIRERTGLHPCDKRRALSVYKQQYTYVDFDHIHHEEDPLFPKYTLREPEEQVKARAREFLDWLASREEREIVVVSHSNFLRILLNQVLQVELQHEDQGGKFANCEIKTYVL 244 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2161.5702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2161.5702.1 >prot_H-paniculata_contig2161.5702.1 ID=prot_H-paniculata_contig2161.5702.1|Name=mRNA_H-paniculata_contig2161.5702.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp MAGDAVAEGESRKAVGVVLRSSAKTVHFIRHAEGTHNKAAKEEGREAYDKback to top mRNA from alignment at H-paniculata_contig2161:9352..21747+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2161.5702.1 ID=mRNA_H-paniculata_contig2161.5702.1|Name=mRNA_H-paniculata_contig2161.5702.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12396bp|location=Sequence derived from alignment at H-paniculata_contig2161:9352..21747+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2161:9352..21747+ >mRNA_H-paniculata_contig2161.5702.1 ID=mRNA_H-paniculata_contig2161.5702.1|Name=mRNA_H-paniculata_contig2161.5702.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at H-paniculata_contig2161:9352..21747+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |