mRNA_H-paniculata_contig21438.5643.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE) HSP 1 Score: 446 bits (1147), Expect = 3.730e-139 Identity = 260/558 (46.59%), Postives = 333/558 (59.68%), Query Frame = 1
Query: 115 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 1719
S++ ++VDSGA+ +Y D L PG+R + + ++L +P I TAG H L GV G+L G + D G R V ++VPGLG NLFSV A NGV S+F +NPRLE+ + VP++ D S+ I T G GLA++ +TA LWHRRMGH+N SL++L+ +G+D+ G V DC C +GKS Q HPK A V FQLV D +GP P ALGGFKYA K D++T+W E+ L+K K ++ A + F + VIP R+ LRADKG EF +R YC G+ L+FAS NTP QIG +ER GRT+ +VRCMLADS LP+ LWGELM TA YL+NR PH+AL +P+K L GT+ L HLRV+GARAFVH E HT KL +A EGRLVGYS SKSYR+YN TRR+ ESRNV+FIET PP L G D YA DD +RD+R++T+ SVD + + +P V ELLE IST+ RD+ + A P S ASP G PPE
Sbjct: 416 SSILMLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 955
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE) HSP 1 Score: 431 bits (1109), Expect = 2.080e-133 Identity = 255/559 (45.62%), Postives = 327/559 (58.50%), Query Frame = 1
Query: 115 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDG-ALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 1719
S++ ++ DSGA+ +Y D L PG+R + + ++L +P I TAG H L GV G+L G + D G R V ++VPGLG NLFSV A NGV S+F +NPRLE+ + VP++ D S+ I T G GLA++ +TA LWHRRMGH+N SL++L+ +G+D+ G V DC C +GKS Q HPK A V FQLV D GP LGGFKYA K D++T+W E+ L+K K ++ + F + VIP R+ LRA KG EF +R YC G+ L+FAS NTP QIG +ER GRT+ +VRCMLADS LP+ LWGELM TA YL+NR PH+AL +P+K L GT+ L HLRV+GARAFVH E HT KL +A EGRLVGYS SKSYR+YN TRR+ ESRNV+FIET PP L G D YA DD +RD+R++T+ SVD + + +P V ELLE IST+ RD+ + A P S ASP G PPE
Sbjct: 321 SSILMLEDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTFGPFTSTTLGGFKYATKFVDQHTKWKEVVLMKDKTSCSIDGLELFNKGTVIPRSARIHVLRAGKGAEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETNPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 861
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 433 bits (1113), Expect = 2.420e-130 Identity = 246/518 (47.49%), Postives = 315/518 (60.81%), Query Frame = 1
Query: 115 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERIS 1629
S++ ++VDSGA+ +Y D L PG+R + + ++L +P I TAG H L GV G+L G + D G R V ++VPGLG NLFSV A NGV S+F +NPRLE+ + VP++ D S+ I T G GLA++ +TA LWHRRMGH+N SL++L+ +G+D+ G V DC C +GKS Q HPK A V FQLV D +GP P ALGGFKYA K D++T+W E+ L+K K ++ A + F + VIP R+ LRADKG EF +R YC G+ L+FAS NTP QIG +ER GRT+ +VRCMLADS LP+ LWGELM TA YL+NR PH+AL +P+K L GT+ L HLRV+GARAFVH E HT KL +A EGRLVGYS SKSYR+YN TRR+ ESRNV+FIE PT P L D YA DD +RD+R++T+ SVD + +P V ELLE IS
Sbjct: 416 SSILMLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRRVSFRVMLVPGLGNNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPNKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVMFIE------PTPAPPSLDERGF--DDGEFTYADHDDMIRDMRNYTT------NHSVDALPPTHAVGDPSVLELLEDIS 918
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5JKW9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW9_9PHAE) HSP 1 Score: 355 bits (912), Expect = 1.450e-105 Identity = 200/432 (46.30%), Postives = 261/432 (60.42%), Query Frame = 1
Query: 115 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETP 1410
S++ ++VD GA +Y D L PGLR + + + L VP I AG L GV G + G + D G R V ++VPGLG LFSV A GV ++ +N RLE+ + P+Q L ++ T+G + +++AD LWHRRMGH+N SL++L+ NGVD+ G V DC +C +GKS Q HPK A V R FQ V D +GP P AL GFK A K D+ + +G+L F + V+P G R+ LR D+G EF +FR YC+ G+ LEFA+ NTPQQIG ++R RT+ +V C+LADS LP FLWGEL+ TA YL++R PH+AL +P+K L G + L HLRVIG+RAFVH E HT KL +A EGRL GYS SKSYR+YN TRR+ SRNVVFIETP
Sbjct: 506 SSIRMVVDRGARDNYLDPGLTPGLRAHMRDVKYLRVPHTIVAAGQRVLKGVATGTIFGAVTDDNGNDRHVSFCVVLVPGLGTKLFSVTLAMLKGVATLCHPDNHRLESGDVVFPMQTL-------GVDATTGKRIYSIEVESAD---LWHRRMGHINGKSLDVLRKEPVNGVDYTGDVKDCSVCPLGKSAQQPHPKQATYGVLRPFQHVSVDTLGPFTPTALSGFKVATKFVDQKDK-------ACSEGSLALFN---KGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQDIGIELEFAAPNTPQQIGPNDRARRTILNVVHCLLADSTLPNFLWGELIQTAVYLSSRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAREGRL-GYSMDSKSYRIYNSETRRVRVSRNVVFIETP 916
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE) HSP 1 Score: 343 bits (880), Expect = 4.620e-103 Identity = 194/419 (46.30%), Postives = 252/419 (60.14%), Query Frame = 1
Query: 394 GVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDM 1650
GV ++F +NPRLE+ + P+Q L ++ T+G + +++AD LWHRRMGH+N +L++L+ NGVD+ G V C +C +GKS Q HPK A V R FQ D +GP P ALGG KYA K D+ T+W EI L+K + ++ + F + V+P G R+ LR D+G EF +FR YC+ G+ LEFAS N PQQIG +ER GRT+ +VRC+LADS LP FLWGEL+ TA YL+NR PH+AL +P+K L G + L HLRVIG+RAFVH E HT KL +A EGRLVGYS SKSYR+YN TRR+ SRNVVFIETPP E D Y T DD +RD+R++T S+D + V ELLE+I T RD+
Sbjct: 4 GVATLFHPDNPRLESGDVFFPMQTL-------GVDATTGKRIYSIKVESAD---LWHRRMGHINGKNLDVLRKEQVNGVDYTGDVKYCSVCPLGKSAQQPHPKQATYGVLRPFQ---HDTLGPFAPTALGGSKYATKFVDQQTKWAEIVLMKDETCSVDSLALFNKGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQDIGIKLEFASPNIPQQIGANERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIETPPVAPALDEFGF--------DDREFTYDTHDDMVRDVRNYT------FNHSIDSLPPDHDVGDIPVIELLEQIHETTNRDL 395
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE) HSP 1 Score: 346 bits (888), Expect = 7.050e-102 Identity = 195/432 (45.14%), Postives = 252/432 (58.33%), Query Frame = 1
Query: 178 PGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD------LYFFSLEITSGSGAPGLAMQAAD-------TATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLL-------EFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPP 1413
PGLR + + + L VP I AG H L GV G G + D G R V ++VPGL NLFSV A G ++ ++PRLE+ + +P+Q L D +Y +++ +G P + A D +A LWHRRMGH+N L++L+ NGVD+ G V DC + + V R FQ V D +GP P ALGGFKYA K ++ T+W EI L+K K ++ + F + V+P G R+ LR D+G EF +FR YC+ + L EFAS NTPQQIG + R GRT+ +VRC+LADS LP FLWGEL+ TA YL+NR PH+AL +P+K L G + L HLRVIG+RAFVH HT KL +A EGRLVGYS SKSYR+YN TRR+ SRNVVFIETPP
Sbjct: 452 PGLRAHMRDVEHLRVPHTIVAAGQHVLKGVATGTFFGAVTDDNGTDRHVSFCVILVPGLSTNLFSVTLAMLKGEATLVHPDDPRLESGDVVIPMQTLGVDTTTGKRIYSIEVKLGGEAGGPMVLEDAPDALALKVESADLWHRRMGHINGKRLDVLRKEPVNGVDYTGDVKDCHLRR--PAPLXXXXXXXXXXVLRPFQHVSVDTVGPFKPTALGGFKYATKFVEQQTKWEEIVLMKDKPCSVDSLALFNKGTVVPAGERIPCLRGDQGTEFTSAEFRQYCQNISIKLXNISIKLEFASPNTPQQIGANARAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEATHTRKLEHRAWEGRLVGYSTVSKSYRIYNSETRRVRVSRNVVFIETPP 881
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE) HSP 1 Score: 342 bits (877), Expect = 1.550e-99 Identity = 184/444 (41.44%), Postives = 257/444 (57.88%), Query Frame = 1
Query: 139 SGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLET-------NNFTVPLQELESDLYFFSLEITSGSGAPG---------------LAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIE 1404
SGASGHY D L+P L L ++ +T P KI AGG +L G +G++ D EG R V+ C VVPGLGR+LFS A + G +I + PR+E + + L+E+ + LYF + + + +A A+ LWHRR+ H ++ + + + GV + C+ C + KS Q HPKTA + + Q V TDL+GPI P A GGF Y K +DEY+R +YL++TKD A+ + FI +VIP G R+ERLR+D GGE+ + +C+ G++ EF + TPQQ G+SER GRTL +VRC+L LP +LWGEL TA ++ NR PH L ++P+ + G + LRHLRVIG+ AFVH+E + KLA +A G LVGYS +S +YR+YNP T+RI+ SRNV FIE
Sbjct: 311 SGASGHYLDSELLPDLENILDDFTYITTPTKIIGAGGIELEGTSKGIISVFAKDEEGNDRRVRFKCTVVPGLGRHLFSTGTAQKKGANTIMS-DQPRIELPATSRDGSTIALVLREVGT-LYFLDVRLDTNQCERRRRITEENMNTYENSYVAAPRAEPYNLWHRRLAHCHKGIIEAAARIKETGVKLTDNLDPCETCKLQKSTQRKHPKTAKHTAVQPCQRVYTDLLGPISPPAKGGFNYVSKFTDEYSRMNVVYLIRTKDEAIDTLERFIDDIVIPNGFRLERLRSDCGGEYTAEYYTKFCKTIGIVQEFTAPATPQQNGISERAGRTLMNIVRCLLHGGQLPEYLWGELCCTAVHITNRLPHVHLNNETPYYRMFGKQASLRHLRVIGSSAFVHVETYKSKLANRAWPGILVGYSPNSNAYRIYNPHTKRIVPSRNVTFIE 752
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE) HSP 1 Score: 325 bits (833), Expect = 2.630e-98 Identity = 174/423 (41.13%), Postives = 244/423 (57.68%), Query Frame = 1
Query: 121 VSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEIT-----SGSGAPGLAMQAADTAT--------------LWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEAL---GGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGY 1323
V ++VD+GAS FD+ LIP L +Y + P+ + AG QL G G+L + D+ G + V+I L+VPGLGRN+FS + G+ + + + P L +PL + D +L+IT SG L + T WHRR+GHLN SL++L+ VD+ ++ C +C + K Q HPK + ++ R QLV+ D MGP+ P A G F YACK++D+YT+ E+YLL+ K A ++ + GG R+E +R DKGGE G++FR YC+ + + LE+A+TNTPQQIG+SER G+TLA + RC+L D P +WGELM TAAYL NR+PHSALG +P+ L+ PDL LRVIGARAFVH ER+ KL +A EG+L G+
Sbjct: 206 VGLLVDTGASEPMFDNRLIPD--GNLHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGF 626
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE) HSP 1 Score: 327 bits (839), Expect = 2.640e-95 Identity = 187/492 (38.01%), Postives = 268/492 (54.47%), Query Frame = 1
Query: 118 TVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELES--DLYFFSLEITSGSGAP----------GLAMQAADT----------------------------------------ATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTAD-NQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGE 1434
T ++ VD+GAS H+ D+ LIP L ++ Y ++ P I AG QL G +G L+ + D G R +++ + VP LGR+LFS A + GV S F + L+T F +PL+ ++ L+ F L I S A L ++A+T A WH+R+GH N L L +D +GV + C C + KS Q HPK A+ + + QLV TDL+GPI P A+GG+ Y K +D TR +Y + K AL + +++Q + IP G+RV+ L +D GGE++ +DFR YCR TG++ F+S +TPQQ G+SER GRT+ M RC++ ++ LP LWGE+ T+ +L NR PH AL +P+ + G + +L LR+IG+RAFVHIE HT KL KA EG LVGY++ S ++R+YN T RI +RNV FIE PP + P E
Sbjct: 42 TFTMTVDTGASNHFLDNELIPALEQRMVEYTKIDPPLLIHVAGQGQLHGTAKGALKVTVTDQNGNPRSIRLPFICVPKLGRHLFSGGTARKQGV-STFIGSTSFLDTGVFKIPLRPDDACDTLFHFDLAIAPDSVATHHAFSTISGLDLPTESANTVYTSASASSASSTTTGAVAGARPAXXXXXXXXXXXXXTASANTWHQRLGHPNVQVLEQLARIDGSGVHLRDSFSACGTCKINKSSQQNHPKIANMDGITERLQLVSTDLLGPISPSAIGGYNYMAKFTDHATRLKAVYFIAKKGDALSSLVNYVQDVAIPLGLRVQYLHSDNGGEYVNSDFRDYCRTTGIIQRFSSPHTPQQNGISERDGRTIMNMARCIINETNLPKHLWGEIAATSVFLINRLPHKALKGDTPYFRMFGKQANLSFLRIIGSRAFVHIEGHTTKLQAKAWEGVLVGYNDDSPTFRIYNRTTGRITSTRNVTFIEKPPAVLPIVE 532
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 330 bits (846), Expect = 3.810e-94 Identity = 216/540 (40.00%), Postives = 277/540 (51.30%), Query Frame = 1
Query: 283 RGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRII--------------------------------------ESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 1719
RGH+ D +C +VPGLG NLFSV A NGV S+F +NPRLE+ + VP++ D S+ I T G GL ++ +TA LWHRRMGH+N SL++L+ +G+D+ G V DC C +GKS Q HPK A V FQLV D +GP P ALGGFKYA K D++T+W E+ L+K K ++ A + F + VIP R+ LRADKG EF +R YC G+ L+FAS NTP QIG +ER GRT+ +VRCMLADS LP+ LWGELM TA YL+NR PH+AL T+ L HLRV+GARAFVH E HT KL + R V SN + ++N + + ESRN +FIET PP L G D YA DD +RD+R++T+ SVD + + +P V ELLE IST+ RD+ + A P S ASP G PPE
Sbjct: 602 RGHVQDCS--------ACPLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLPLRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNXXXXXXXFSTDAHLGHLRVVGARAFVHEETHTKKL-----DSRXVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRRGESRNGIFIETNPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 1110 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21438.5643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21438.5643.1 >prot_H-paniculata_contig21438.5643.1 ID=prot_H-paniculata_contig21438.5643.1|Name=mRNA_H-paniculata_contig21438.5643.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=699bp SNNNLNSKPETFRGITDVDDGSALAAGPAFEKWNDDNNSTVSVMVDSGASback to top mRNA from alignment at H-paniculata_contig21438:2109..4205+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21438.5643.1 ID=mRNA_H-paniculata_contig21438.5643.1|Name=mRNA_H-paniculata_contig21438.5643.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2097bp|location=Sequence derived from alignment at H-paniculata_contig21438:2109..4205+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21438:2109..4205+ >mRNA_H-paniculata_contig21438.5643.1 ID=mRNA_H-paniculata_contig21438.5643.1|Name=mRNA_H-paniculata_contig21438.5643.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4194bp|location=Sequence derived from alignment at H-paniculata_contig21438:2109..4205+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |