prot_H-paniculata_contig21232.5567.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21232.5567.1
Unique Nameprot_H-paniculata_contig21232.5567.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
[Close]
BLAST of mRNA_H-paniculata_contig21232.5567.1 vs. uniprot
Match: A0A6H5KQD4_9PHAE (Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD4_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 2.550e-6
Identity = 23/47 (48.94%), Postives = 28/47 (59.57%), Query Frame = 0 
Query:    1 WEGRPGTSWFSQQPSVLVLDDFKCHHDQKLQESLKKKVNTDTILILG 47
            W   P      Q+PS+LVLDDFKCH D+   + L K+ NT  ILI G
Sbjct: 1253 WRLCPNHESIKQRPSILVLDDFKCHRDKAFIDDLGKRCNTSVILIPG 1299
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21232.5567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQD4_9PHAE2.550e-648.94Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 131... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21232contigH-paniculata_contig21232:2466..2648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21232.5567.1mRNA_H-paniculata_contig21232.5567.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21232 2466..2648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21232.5567.1 ID=prot_H-paniculata_contig21232.5567.1|Name=mRNA_H-paniculata_contig21232.5567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
WEGRPGTSWFSQQPSVLVLDDFKCHHDQKLQESLKKKVNTDTILILGAYQ
WLTSLARACLT
back to top