mRNA_H-paniculata_contig2110.5515.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: D7FPY6_ECTSI (V-type proton ATPase subunit a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY6_ECTSI) HSP 1 Score: 246 bits (629), Expect = 2.060e-73 Identity = 131/162 (80.86%), Postives = 145/162 (89.51%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQIKKFNLKVASAGTVESFVQSSM---VPRSADASHT--GQALLVKLEGDLEALESHLLDLNRYSERLTSEYNEKVELQEVLLKTQGLFAAEV 471
MARWFRSEDMAYVSIIVNEDAAH+CI+DLG+LG IQFTDLNPELTAFQRRYV Y+KRIDELERKL+FFGE++KKF+LKVASAGTVESFVQSS V A+A GQALL KLE DLEALESHL++LN Y+ERLTSEYNEKVELQEVLLKT+GLFAAE+
Sbjct: 84 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEVKKFDLKVASAGTVESFVQSSSAQGVGSGAEAKSVLGGQALLQKLEADLEALESHLVELNTYNERLTSEYNEKVELQEVLLKTKGLFAAEM 245
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: A0A6H5KYR4_9PHAE (V-type proton ATPase subunit a n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR4_9PHAE) HSP 1 Score: 199 bits (506), Expect = 4.300e-62 Identity = 112/177 (63.28%), Postives = 124/177 (70.06%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQI---------------------------------KKFNLKVASAGTVESFVQSSMVPRSADASHT-----GQALLVKLEGDLEALESHLLDLNRYSERLTSEYNEK 417
MARWFRSEDMAYVSIIVNEDAAH+CI+DLG+LG IQFTDLNPELTAFQRRYV Y+KRIDELERKL+FFGE++ KKF+LKVASAGTVESFVQSS + GQALL KLE DLEALESHL++LN Y+ERLTSEYNEK
Sbjct: 1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEVRFSTVLATHGLLTDDGTQQAELVTQTFGGCAEVKKFDLKVASAGTVESFVQSSAAQGMGSGAEAKSVLGGQALLQKLETDLEALESHLVELNTYNERLTSEYNEK 177
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: A0A6U2Q738_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2Q738_9STRA) HSP 1 Score: 183 bits (464), Expect = 6.160e-56 Identity = 95/160 (59.38%), Postives = 121/160 (75.62%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQIKKFNLKVASAGTVESFVQ--SSMVPRSADAS--HTGQALLVKLEGDLEALESHLLDLNRYSERLTSEYNEKVELQEVLLKTQGLFAAE 468
MA+WFRSE+M YVS+IVNEDAAH C++DLG+LG +QFTDLNP+LT FQRRYV+Y+KR DELERKL +FG + +F+L + +AGTV++F+ SS+V AS +G LL LE +LE ES L DLN +SE+LT EYNEKVELQEVL K + F +
Sbjct: 1 MAKWFRSEEMEYVSLIVNEDAAHQCLSDLGKLGVLQFTDLNPDLTPFQRRYVSYVKRCDELERKLRYFGNECDRFDLTIDNAGTVDNFLNTPSSVVSSGPGASGGESGAQLLETLEAELEQYESQLKDLNAFSEKLTMEYNEKVELQEVLEKARRFFMTD 160
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: A0A835ZAQ4_9STRA (V-type proton ATPase subunit a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ4_9STRA) HSP 1 Score: 197 bits (502), Expect = 9.690e-56 Identity = 104/171 (60.82%), Postives = 123/171 (71.93%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQIKKFNLKVASAGTVESFVQSSMV------------PRSADASHTGQALLVKLEGDLEALESHLLDLNRYSERLTSEYNEKVELQEVLLKTQGLFAAEVSV 477
MA WFRSEDM YVS+I+NEDAAHSCI+DLG+LG +QFTDLNPELT FQRRYV ++KRIDELERK+ FFGE+I KF L A G V F+ S V P S A +G LL +E D+E E L++LNRYSERLT+EYNEKVE QEVLLKT+G F ++V V
Sbjct: 1 MASWFRSEDMTYVSLIMNEDAAHSCISDLGKLGVVQFTDLNPELTPFQRRYVNFIKRIDELERKIKFFGEEIHKFGLHAAYQGEVGPFIDSGGVVPGAPATADGAQPGSPPAPRSGVQLLETMERDMEKEEQSLVELNRYSERLTAEYNEKVEFQEVLLKTRGFFVSQVQV 171
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: A0A7S2IB47_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IB47_9STRA) HSP 1 Score: 184 bits (467), Expect = 1.040e-55 Identity = 93/161 (57.76%), Postives = 120/161 (74.53%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQIKKFNLKVASAGTVESFVQSSMVPRSADASHTGQALLVKLEGDLEALESHLLDLNRYSERLTSEYNEKVELQEVLLKTQGLFAAEVSVLV 483
M+RWFRSE M Y+S+IVN DAAH C++DLG+LG IQFTDLNPELT FQRRYV+Y+KR DELERKL +F + KF L + SAG+++SFV +S + ++ + +G LL LE +LE E+ L +LN YSE+LT+EYNEKVELQEVL K + F E +V
Sbjct: 28 MSRWFRSEPMEYISLIVNGDAAHDCLSDLGKLGVIQFTDLNPELTPFQRRYVSYVKRCDELERKLRYFSTECDKFGLPLDSAGSIDSFVNASEEMKFSNPAESGNKLLESLETELEEYENQLRELNSYSEKLTTEYNEKVELQEVLEKARTFFTNEAPGIV 188
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: K0RXJ3_THAOC (V-type proton ATPase subunit a n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXJ3_THAOC) HSP 1 Score: 179 bits (453), Expect = 2.870e-54 Identity = 93/161 (57.76%), Postives = 116/161 (72.05%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQIKKFNLKVASAGTVESFVQSSMVPRSADASHTGQA-----LLVKLEGDLEALESHLLDLNRYSERLTSEYNEKVELQEVLLKTQGLFAAE 468
MARWFRSE M Y+S+IVNEDAAH C+ADLG+L IQFTDLNP+LT FQRRYV+Y++R DELERKL FFG + F L + +AG ++SF++S+ A + G+A LL LE +LE ES L +LN YSE+LT EYNEKVELQEVL K + F +
Sbjct: 1 MARWFRSEHMEYISLIVNEDAAHDCLADLGKLSAIQFTDLNPDLTPFQRRYVSYVRRCDELERKLRFFGSECDNFGLNLETAGDIDSFIESNSSIVGARSGVAGKAASGTQLLESLEVELEGYESQLKELNAYSEKLTREYNEKVELQEVLEKARRFFMTD 161
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: B7G3I2_PHATC (V-type proton ATPase subunit a n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3I2_PHATC) HSP 1 Score: 190 bits (483), Expect = 2.160e-53 Identity = 99/165 (60.00%), Postives = 123/165 (74.55%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQIKKFNLKVASAGTVESFVQSSMVPRSAD--ASHTGQALLVKLEGDLEALESHLLDLNRYSERLTSEYNEKVELQEVLLKTQGLFAAEVSVLVDL 489
MARWFRSE M Y+S+IVNEDAAH C+ADLG+LG IQFTDLNP+LT FQRRYV+Y+KR DELERKL +F +I+KF + + SAGTV++FV S + S + +G LL LE +LE ES L +LN YSE+LT+EYNEKVELQEVL K GL ++ + DL
Sbjct: 1 MARWFRSEPMEYISLIVNEDAAHDCLADLGKLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRYFSNEIEKFEIDLVSAGTVDNFVMSPTLVSSMGNGSKKSGAQLLESLEVELEQYESQLRELNSYSEKLTTEYNEKVELQEVLEKAHGLLDSDAAPRPDL 165
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: A0A7S2YHW8_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHW8_9STRA) HSP 1 Score: 186 bits (472), Expect = 2.270e-53 Identity = 95/158 (60.13%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQIKKFNLKVASAGTVESFVQS-SMVPRSADAS-HTGQALLVKLEGDLEALESHLLDLNRYSERLTSEYNEKVELQEVLLKTQGLFAAE 468
M+RWFRSE M Y+S IVNEDAAH C+ADLG++G IQFTDLNP+LT FQRRYV+Y+KR DELERKL +F +I KF L + SAGT+++FV S S+V + DA+ +G LL +E +LE E L +LN YSE+LT EYNEKVELQEVL K + F +
Sbjct: 1 MSRWFRSEPMEYISFIVNEDAAHDCLADLGKMGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRYFSNEIDKFELDLVSAGTIDNFVNSPSLVSGTTDATKRSGAQLLESMEAELEQYEGQLRELNNYSEKLTKEYNEKVELQEVLEKARRFFMTD 158
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: A0A6U3QY71_9STRA (V-type proton ATPase subunit a n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QY71_9STRA) HSP 1 Score: 191 bits (484), Expect = 2.400e-53 Identity = 96/162 (59.26%), Postives = 122/162 (75.31%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQIKKFNLKVASAGTVESFVQSSMVPRSADASHTGQALLVKLEGDLEALESHLLDLNRYSERLTSEYNEKVELQEVLLKTQGLFAAEVSVLVD 486
M+RWFRSE M Y+S+IVN DAAH C++DLG+LG IQFTDLNPELT FQRR+V+Y+KR DELERKL +FG + KF L + SAGTV+SFV +S ++++ + +G LL LE +LE ES L +LN YSE+LT+EYNEKVELQEVL K + F E +V
Sbjct: 1 MSRWFRSEPMEYISLIVNGDAAHDCLSDLGKLGVIQFTDLNPELTPFQRRFVSYVKRCDELERKLRYFGSECDKFGLALESAGTVDSFVTASEEVKASNPAESGNKLLESLETELEGYESQLRELNSYSEKLTTEYNEKVELQEVLEKARRFFMTEAPRIVQ 162
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Match: A0A7R9VLE8_9STRA (V-type proton ATPase subunit a (Fragment) n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9VLE8_9STRA) HSP 1 Score: 184 bits (467), Expect = 5.890e-53 Identity = 94/157 (59.87%), Postives = 114/157 (72.61%), Query Frame = 1
Query: 1 MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRYVTYMKRIDELERKLSFFGEQIKKFNLKVASAGTVESFVQSSM-VPRSADASHTGQALLVKLEGDLEALESHLLDLNRYSERLTSEYNEKVELQEVLLKTQGLFAAE 468
M+RWFRSE+M Y+S+IVNEDAAH C+ADLGRLG IQFTDLNP+LT FQRRYV+Y+KR DELERKL FF FNL + AG V+ F+ M + S +G ALL LE +LE E+ L +LN YSE+LT+EYNEKVELQEVL K + F +
Sbjct: 1 MSRWFRSEEMEYISLIVNEDAAHDCLADLGRLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRFFANACDSFNLSLHPAGDVDEFLDQQMQAAATGGKSESGAALLESLENELEGYETQLKELNSYSEKLTTEYNEKVELQEVLEKARRFFMTD 157 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2110.5515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2110.5515.1 >prot_H-paniculata_contig2110.5515.1 ID=prot_H-paniculata_contig2110.5515.1|Name=mRNA_H-paniculata_contig2110.5515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp MARWFRSEDMAYVSIIVNEDAAHSCIADLGRLGTIQFTDLNPELTAFQRRback to top mRNA from alignment at H-paniculata_contig2110:741..1595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2110.5515.1 ID=mRNA_H-paniculata_contig2110.5515.1|Name=mRNA_H-paniculata_contig2110.5515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=855bp|location=Sequence derived from alignment at H-paniculata_contig2110:741..1595- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2110:741..1595- >mRNA_H-paniculata_contig2110.5515.1 ID=mRNA_H-paniculata_contig2110.5515.1|Name=mRNA_H-paniculata_contig2110.5515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig2110:741..1595- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |