prot_H-paniculata_contig2096.5460.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2096.5460.1
Unique Nameprot_H-paniculata_contig2096.5460.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length179
Homology
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BLAST of mRNA_H-paniculata_contig2096.5460.1 vs. uniprot
Match: D8LJ92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ92_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.980e-58
Identity = 105/178 (58.99%), Postives = 130/178 (73.03%), Query Frame = 0 
Query:    1 MHAKSATATFPYTYPSATSLSVAVPLLAEATGAVVQEVALQDVVSTATETGLLSDGKLDFIVATVPETGTIRETDSALMGVITSLEQESKGSFLLMWTGDFHGEGCGRRSLAAVRASARRLQTTEASYRTIKMTPDILSGVLVLLLFLFIISAGLGCIGAIECPQSFNSVKPAMGREY 178
            +HAKSA+ATFPYTYPS T+L  A+PLLA      V  + L++VV  +   GLL DGKLD I+ TVPE  TI ETD+ +  V +SLE++S G F+ +WTGDFH E CGRRSL A   + RRL  TE+  RTIK+TPDIL+G+L LLLFLFI+  GLGC+G IECP+SF+S  PA GREY
Sbjct:  121 LHAKSASATFPYTYPSPTTLRNALPLLAGELEVPVHTLPLEEVVPASASLGLLDDGKLDLIIVTVPEAATIEETDATVRTVTSSLEEKSVGRFIFLWTGDFHDEACGRRSLKAESRAHRRL-ATESLTRTIKITPDILAGLLTLLLFLFILVTGLGCVGDIECPKSFSSEDPAKGREY 297
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BLAST of mRNA_H-paniculata_contig2096.5460.1 vs. uniprot
Match: A0A7S2WS17_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS17_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.440e-8
Identity = 43/130 (33.08%), Postives = 74/130 (56.92%), Query Frame = 0 
Query:   51 GLLSDGKLDFIVATVPETGTIRETDSALMGVITSLEQESKGSFLLMWTGD--FHGEGCGRRSLAAVRASARRLQTTEASYRTIKMTPDILSGVLVLLLFLFIISAGLGCIGAIECPQSFNSVKPAMGREY 178
            G+ S+G+ + +V  VP +G   +   A+  ++ +LE+ ++G+F ++ T +  F        +L    A ARRL +  +S + ++MTPDIL+G+L  +L   I   GL C+G+I+ P  F+ V P   REY
Sbjct:  143 GVGSNGECEVVVCQVPSSG---DAGPAVKLLVDTLERSTRGNFAVVMTLENRFALTPEFEAALEIPSAHARRLSSA-SSTQGVRMTPDILAGLLTGILLTVIALTGLCCLGSIQTPTKFSDVPPPSTREY 268
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2096.5460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ92_ECTSI1.980e-5858.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2WS17_9STRA1.440e-833.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..178
NoneNo IPR availableTMHMMTMhelixcoord: 137..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2096contigH-paniculata_contig2096:9364..14936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2096.5460.1mRNA_H-paniculata_contig2096.5460.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2096 7644..21662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2096.5460.1 ID=prot_H-paniculata_contig2096.5460.1|Name=mRNA_H-paniculata_contig2096.5460.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp
MHAKSATATFPYTYPSATSLSVAVPLLAEATGAVVQEVALQDVVSTATET
GLLSDGKLDFIVATVPETGTIRETDSALMGVITSLEQESKGSFLLMWTGD
FHGEGCGRRSLAAVRASARRLQTTEASYRTIKMTPDILSGVLVLLLFLFI
ISAGLGCIGAIECPQSFNSVKPAMGREY*
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