prot_H-paniculata_contig2092.5450.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2092.5450.1
Unique Nameprot_H-paniculata_contig2092.5450.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length371
Homology
BLAST of mRNA_H-paniculata_contig2092.5450.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.690e-8
Identity = 49/140 (35.00%), Postives = 70/140 (50.00%), Query Frame = 0
Query:   20 GYEKCVKVMLLMLKQSVVG--KKAYVPTINLQLVSKDLCTICRQSSLIHVRVEEGTPRSLYVPLRIPQTGKLHKSQQPIC--VPTVQAHAVTWKPSPSPLFLENDRLVKLETLIFHARFD---CSLDNVVWPSRLKRLRF 152
            G  KC+   ++ L Q+  G  K+ YV T+ LQLVS ++C  CR+   +HVRV+  TP SL+ P +   T      +  I   VP VQA  +TW      L   +   V+  +    A       SL++ VWP RLKR+ F
Sbjct:    5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVF 144          
BLAST of mRNA_H-paniculata_contig2092.5450.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.590e-7
Identity = 50/144 (34.72%), Postives = 73/144 (50.69%), Query Frame = 0
Query:   20 GYEKCVKVMLLMLKQSVVG--KKAYVPTINLQLVSKDLCTICRQSSLIHVRVEEGTPRSLYVPLRIPQTGKLHKSQQPIC----VPTVQAHAVTWKPS----PSPLFLENDRLVKLETLIFHARFDCSLDNVVWPSRLKRLRFA 153
            G    +  +++ L Q+  G  K+ YV T+ LQLVS +LC  CR + L+HV V E TP +L+   R  +T    +S + +C    VP VQA   TW       P     E   + +      H+ F  S+++VVWP  LKRL F+
Sbjct:   85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSS-RTSRTTPSQRSPE-VCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHS-FAASVESVVWPESLKRLVFS 225          
BLAST of mRNA_H-paniculata_contig2092.5450.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 8.240e-6
Identity = 50/144 (34.72%), Postives = 71/144 (49.31%), Query Frame = 0
Query:   23 KCVKVMLLMLKQSVVG--KKAYVPTINLQLVSKDLCTICRQSSLIHVRVEEGTPRSLYVPLRIPQTG------KLHKSQQPICVPTVQAHAVTWKPSPSPLFLENDRLVKLETLIFHARFDC-------SLDN-VVWPSRLKRL 150
            +C+   ++ L Q+  G  K+ Y  T+ LQL S DLC  CR +S++HV V++ TPRSL+   R  QT        LH S +   VP V+A  +TW  S   L     R   +E   +  R +        SL + VVWP  L +L
Sbjct:   10 RCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSS-RTAQTRPNTRSWNLHISSR---VPVVRALRLTWALSMEALL----RKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQL 145          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2092.5450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KNI6_9PHAE1.690e-835.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTK8_ECTSI1.590e-734.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LIJ3_9PHAE8.240e-634.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 290..332
e-value: 1.1E-9
score: 38.3
coord: 246..288
e-value: 2.9E-7
score: 30.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 233..357
e-value: 9.4E-6
score: 26.3
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 117..357
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 117..357
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 121..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2092contigH-paniculata_contig2092:4132..6730 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2092.5450.1mRNA_H-paniculata_contig2092.5450.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2092 2781..14582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2092.5450.1 ID=prot_H-paniculata_contig2092.5450.1|Name=mRNA_H-paniculata_contig2092.5450.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=371bp
MVTSGTAVNKAMGVLDPQTGYEKCVKVMLLMLKQSVVGKKAYVPTINLQL
VSKDLCTICRQSSLIHVRVEEGTPRSLYVPLRIPQTGKLHKSQQPICVPT
VQAHAVTWKPSPSPLFLENDRLVKLETLIFHARFDCSLDNVVWPSRLKRL
RFAPGSRFNQAIERVLWPIALQQISFADLFNKPIDEVVWPTTLERLTLGG
WFNQPIDRVKWPSSLRQLTFGHAFNHPIAKVLWPALLQQLDLGWVFNQRI
DKVAWPPSLRGLALGDEFNQPVDSVVWPPSLQQLSFGQNFNQPIDKVLWP
SGLTQLTFGYDFNQPIENVLWPDSLQRLTLGEEFDHPIDRVVWPTSLRRL
DRKIGTSVVHHAIPGRSNST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf