prot_H-paniculata_contig2085.5422.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2085.5422.1
Unique Nameprot_H-paniculata_contig2085.5422.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length411
Homology
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BLAST of mRNA_H-paniculata_contig2085.5422.1 vs. uniprot
Match: A0A6H5K6H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H5_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 8.150e-65
Identity = 112/169 (66.27%), Postives = 127/169 (75.15%), Query Frame = 0 
Query:  228 GVAKHACLSFSEVEVDEEEHDIDDILDSNSAGSFGSAAGGTMRGSGRISREVLHRRLKKRIKAWRRFLAVMQDHGLRVRKHHRRGKGWAHRVVKYDPALPGLTWKSSKWWDSSGGQLPLRDVLDVERSGKTVWVKCLHLGTVGFEATLENDSVIFYLAMDSLLNKRCGV 396
            G  +H  LSFSEV+VDEE+ D DD L                       RE+ HRR KKR +AW+ FLAVMQ+HGLRVRK+HR GKGWAHR+VKYDP LPGL WKSSKWWDS GGQ+PLRDVLDVER GK VWVKCLHLGT+GFEA+LE D+V+FYLAMDSLL+ RCGV
Sbjct:  278 GAERHGYLSFSEVQVDEED-DTDDRLGHXXXXXXXXXXXX-------FGREMPHRRRKKRERAWKLFLAVMQEHGLRVRKYHRHGKGWAHRIVKYDPNLPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGV 438
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BLAST of mRNA_H-paniculata_contig2085.5422.1 vs. uniprot
Match: D7FS79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS79_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 2.000e-53
Identity = 81/101 (80.20%), Postives = 91/101 (90.10%), Query Frame = 0 
Query:  298 MQDHGLRVRKHHRRGKGWAHRVVKYDPALPGLTWKSSKWWDSSGGQLPLRDVLDVERSGKTVWVKCLHLGTVGFEATLENDSVIFYLAMDSLLNKRCGVQE 398
            +Q+HGLRVRK+HR GKGWAHR+VKYDP LPGL WKSSKWWDS GGQ+PLRDVLDVER GK VWVKCLHLGT+GFEA+LE D+V+FYLAMDSLL+ RCGV  
Sbjct:  115 VQEHGLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSN 215
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BLAST of mRNA_H-paniculata_contig2085.5422.1 vs. uniprot
Match: D8LGR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR7_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 2.730e-5
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0 
Query:  294 FLAVMQDHGLRVRKHHRRGKGWAH-RVVKYDPALPGLTWKSSKWWDSSGGQLPLRDVLDVE-RSGKTVWVKCL--HLGTVGFEATLENDSVIFYLAMDSL 389
            FL VM   GLRVRKHHR GKG +  RV++Y+     LTW S K   ++   LP+ DV +V  + GK V + C+        FEA  ++ + + Y+ ++ L
Sbjct:  360 FLEVMTGPGLRVRKHHRAGKGSSGLRVLRYNAEGDSLTWDSHKILGAAQHVLPMSDVENVSMQPGKRVVLMCVGGKDSYAVFEAANDDAAAVLYVGLERL 459
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2085.5422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K6H5_9PHAE8.150e-6566.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS79_ECTSI2.000e-5380.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LGR7_ECTSI2.730e-538.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2085contigH-paniculata_contig2085:8383..17951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2085.5422.1mRNA_H-paniculata_contig2085.5422.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2085 8091..21266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2085.5422.1 ID=prot_H-paniculata_contig2085.5422.1|Name=mRNA_H-paniculata_contig2085.5422.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=411bp
MWAGLFSNDEFNDEDYTRSAAREEDDRLPSWELDVTETSTYSPLRGPTHE
ADYYSPKSTGPVLSQRNRYMPETPEVRAEEDEDEDEDEQSEIGVEQQPDT
ERSQSSSARQPVYTKSPSVTSDRRIHISPKMSLSEGVPIADGVVSTTTTA
DTDQSQGNEGEEEDSTSTVPMDADKHDPSFFHSAPPPPGVDAPTQFRGAY
NTAPPSSNTVKRAAAAVDPPTGEGGRTGVAKHACLSFSEVEVDEEEHDID
DILDSNSAGSFGSAAGGTMRGSGRISREVLHRRLKKRIKAWRRFLAVMQD
HGLRVRKHHRRGKGWAHRVVKYDPALPGLTWKSSKWWDSSGGQLPLRDVL
DVERSGKTVWVKCLHLGTVGFEATLENDSVIFYLAMDSLLNKRCGVQEGD
VCIPGPLASA*
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