mRNA_H-paniculata_contig20607.5349.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: D7G9I1_ECTSI (Cyclopropane-fatty-acyl-phospholipid synthase/ oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I1_ECTSI) HSP 1 Score: 231 bits (590), Expect = 4.890e-68 Identity = 117/145 (80.69%), Postives = 128/145 (88.28%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNGAVEWGSKGLFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAVSVREYLKTNGFSESFARLYLVPMAAALWSANAADVMNHSALAMISFFHNHQMLQV 435
FMVFN++NYPNMV LF+ELGV E TDMSFSVSLD+G VEWGS+GL SLFARKRN S GF+ MLREM RFN+EAPRLL L+D DPRK+VSVREYLK NGFSE+FAR YLVPMAAALWS+ AADVM HSALAMISFFHNHQMLQV
Sbjct: 90 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNALSPGFYGMLREMARFNQEAPRLLELDDEDPRKSVSVREYLKANGFSEAFARYYLVPMAAALWSSTAADVMGHSALAMISFFHNHQMLQV 234
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: A0A835Z030_9STRA (Amine oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z030_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.920e-59 Identity = 97/145 (66.90%), Postives = 114/145 (78.62%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNGAVEWGSKGLFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAVSVREYLKTNGFSESFARLYLVPMAAALWSANAADVMNHSALAMISFFHNHQMLQV 435
FMVFN +NYPN+VGLFKELGVE E+TDMSF+VSLD GA EWGS + +L AR+ N F ML +M RFNREAP LL L+D DPRKA++V EYL+ N +S +FAR YLVPMAAALWS++ A+VM SAL MISFFHNH MLQV
Sbjct: 91 FMVFNHQNYPNLVGLFKELGVEEESTDMSFAVSLDGGAFEWGSASVAALLARRTNALRPSFWRMLADMARFNREAPALLQLDDEDPRKAMTVGEYLRRNNYSAAFARYYLVPMAAALWSSSGAEVMGFSALTMISFFHNHSMLQV 235
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: A0A7S2REM9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REM9_9STRA) HSP 1 Score: 183 bits (464), Expect = 7.550e-51 Identity = 89/145 (61.38%), Postives = 116/145 (80.00%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNGAVEWGSKGLFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAVSVREYLKTNGFSESFARLYLVPMAAALWSANAADVMNHSALAMISFFHNHQMLQV 435
FMV+N +NYPN+ GLF ELGV G+NTDMSFSVS+D G EW GL LFA ++++ S F+ MLR+M RFNREAP LL L D DPRKAV++REYL+ N +SE+FA+L+L+PM A+WSA+ ADV++ AL++I+FF+NHQMLQV
Sbjct: 68 FMVYNDQNYPNINGLFAELGVVGQNTDMSFSVSMDGGRFEWSGTGLNGLFACRKHLVSPSFYLMLRDMLRFNREAPDLLRLPDQDPRKAVTMREYLRQNRYSEAFAKLFLIPMVGAVWSASEADVLSFPALSLIAFFNNHQMLQV 212
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: A0A7S2DZ66_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZ66_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.160e-45 Identity = 79/145 (54.48%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNGAVEWGSKGLFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAVSVREYLKTNGFSESFARLYLVPMAAALWSANAADVMNHSALAMISFFHNHQMLQV 435
FMV N NYPN+ GLFKELGVE T+MSFSVS+D+G VEW GL LFA + N+ S F++MLR++ +FNREAP LL L +DP+ +S+R+YL NG+S++F RLY+VP+ A+WS ++A V+ A++++SF HNHQMLQ+
Sbjct: 89 FMVMNDRNYPNLNGLFKELGVETIPTEMSFSVSVDDGEVEWSGTGLNGLFASRGNIISKDFYTMLRDVFKFNREAPSLLALPKDDPKTRLSMRDYLNANGYSQAFRRLYMVPLVGAIWSTDSAGVLGFDAVSLVSFMHNHQMLQI 233
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: A0A8J9T3Q6_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T3Q6_PHATR) HSP 1 Score: 148 bits (374), Expect = 7.630e-41 Identity = 76/146 (52.05%), Postives = 102/146 (69.86%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNG-AVEWGSKGLFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAVSVREYLKTNGFSESFARLYLVPMAAALWSANAADVMNHSALAMISFFHNHQMLQV 435
FMV+N+ NYPNMV F+ LGV E++DMS SVSLD G VEW S GL LFA +R + S F+ L++M RFN++A +LLL D+DPRK V+ +YL+ +G+S FA+ Y+ PM AALWSA+ DV+ A +I F NH+MLQ+
Sbjct: 66 FMVYNETNYPNMVEWFRTLGVTQEDSDMSLSVSLDGGDTVEWSSDGLDGLFANRRQLVSPPFYRFLKDMIRFNQQAANILLLTDDDPRKHVTTAQYLREHGYSTEFAKFYVFPMMAALWSASMEDVLRFPAAQLIGFLCNHKMLQL 211
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: A0A7S2SHN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SHN9_9STRA) HSP 1 Score: 143 bits (361), Expect = 9.060e-40 Identity = 74/146 (50.68%), Postives = 96/146 (65.75%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNGA-VEWGSKGLFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAVSVREYLKTNGFSESFARLYLVPMAAALWSANAADVMNHSALAMISFFHNHQMLQV 435
FMV+N NYPNM FK+LGVE E +DMS SVSLD+G VEW S G L A K +F F+ L++M RFN EA ++L L DPR+ V++ +YLK G+S+ F YL PM AALWS++ DV+N A +I F NH+MLQ+
Sbjct: 79 FMVYNDHNYPNMCHWFKQLGVESEPSDMSLSVSLDDGKKVEWSSDGFQGLIANKAQLFRPSFYRFLKDMVRFNAEAGKILTLSPEDPRRHVTLGQYLKNEGYSQEFTTHYLFPMTAALWSSSMGDVLNFPADQLIGFMCNHKMLQI 224
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: A0A6H5JX97_9PHAE (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX97_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.280e-39 Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNGAVEWGSKGLFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAV 270
FMVFN++NYPNMV LF+ELGV E TDMSFSVSLD+G VEWGS+GL SLFARKRNV S GF+ MLREM RFN+EAPRLL L+D DPRKAV
Sbjct: 90 FMVFNEQNYPNMVRLFEELGVGSEKTDMSFSVSLDDGDVEWGSEGLSSLFARKRNVLSPGFYGMLREMARFNQEAPRLLELDDEDPRKAV 179
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: B7G7I7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7I7_PHATC) HSP 1 Score: 148 bits (374), Expect = 1.150e-38 Identity = 76/146 (52.05%), Postives = 102/146 (69.86%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNG-AVEWGSKGLFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAVSVREYLKTNGFSESFARLYLVPMAAALWSANAADVMNHSALAMISFFHNHQMLQV 435
FMV+N+ NYPNMV F+ LGV E++DMS SVSLD G VEW S GL LFA +R + S F+ L++M RFN++A +LLL D+DPRK V+ +YL+ +G+S FA+ Y+ PM AALWSA+ DV+ A +I F NH+MLQ+
Sbjct: 66 FMVYNETNYPNMVEWFRTLGVTQEDSDMSLSVSLDGGDTVEWSSDGLDGLFANRRQLVSPPFYRFLKDMIRFNQQAANILLLTDDDPRKHVTTAQYLREHGYSTEFAKFYVFPMMAALWSASMEDVLRFPAAQLIGFLCNHKMLQL 211
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: A0A7S1UKX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKX9_9STRA) HSP 1 Score: 139 bits (349), Expect = 4.550e-38 Identity = 73/145 (50.34%), Postives = 101/145 (69.66%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNGAVEWGSKGLFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAVSVREYLKTNGFSESFARLYLVPMAAALWSANAADVMNHSALAMISFFHNHQMLQV 435
FMV+N +NYPNM LF++LGV+G+ DMSFS SL+ G EW S + A NVFS+ F M +M RFNREA LLLL ++ P +++++RE+L + +S +F LYLVPM AALWS++ A+V++ A +ISFF NH MLQ+
Sbjct: 49 FMVYNAQNYPNMTRLFRDLGVKGQAADMSFSCSLNKGRNEWSS---LNPLATPTNVFSYRFGLMFVDMMRFNREAASLLLLPEDHPERSMTMREWLDEHRYSAAFEELYLVPMNAALWSSSRAEVLSAPAETVISFFSNHNMLQL 190
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Match: A0A448ZB87_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZB87_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.070e-35 Identity = 77/148 (52.03%), Postives = 104/148 (70.27%), Query Frame = 1
Query: 1 FMVFNKENYPNMVGLFKELG-VEGENTDMSFSVSLDNG-AVEWGSKG-LFSLFARKRNVFSWGFHSMLREMTRFNREAPRLLLLEDNDPRKAVSVREYLKTNGFSESFARLYLVPMAAALWSANAADVMNHSALAMISFFHNHQMLQV 435
FMV+N NYPNM F+ LG VE E+TDMS SVSLD G ++EW S G L LFA++ + F++M+R+MTRF+ EA +LLL+ ++DPRK V+VR YL+ NG++ SF YL+PM AALWSA+ V+ A +I F NH+MLQ+
Sbjct: 72 FMVYNAANYPNMTKWFEALGGVEEEDTDMSLSVSLDKGDSLEWTSNGGLNGLFAKRGQLVDSNFYAMVRDMTRFHDEAXKLLLMSEDDPRKHVTVRHYLRQNGYTPSFGVYYLLPMMAALWSASMEXVLEFPARQLIGFLCNHRMLQL 219 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20607.5349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20607.5349.1 >prot_H-paniculata_contig20607.5349.1 ID=prot_H-paniculata_contig20607.5349.1|Name=mRNA_H-paniculata_contig20607.5349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp MVFNKENYPNMVGLFKELGVEGENTDMSFSVSLDNGAVEWGSKGLFSLFAback to top mRNA from alignment at H-paniculata_contig20607:297..2241+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20607.5349.1 ID=mRNA_H-paniculata_contig20607.5349.1|Name=mRNA_H-paniculata_contig20607.5349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1945bp|location=Sequence derived from alignment at H-paniculata_contig20607:297..2241+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20607:297..2241+ >mRNA_H-paniculata_contig20607.5349.1 ID=mRNA_H-paniculata_contig20607.5349.1|Name=mRNA_H-paniculata_contig20607.5349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at H-paniculata_contig20607:297..2241+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |