prot_H-paniculata_contig10836.534.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10836.534.1
Unique Nameprot_H-paniculata_contig10836.534.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length578
Homology
BLAST of mRNA_H-paniculata_contig10836.534.1 vs. uniprot
Match: A0A6H5KRZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ3_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 8.460e-68
Identity = 210/535 (39.25%), Postives = 266/535 (49.72%), Query Frame = 0
Query:    1 VLLDRERERADRLERAKHEEDEALSDELRDIMATVGRGADGIGSNGDAKSPSPSASHQPPLPSTQTTGSSNGRGWVTTVIAGEPKTNWVGAVAAEGNGHSISPRDEKSPRAPAAEAVKTAISSDEDIGREIIGEGLLPLSGSIGGRGDDGGRRRSVGGSVSPRGSGGIDDGGDEVEPSTLAAGSDRV--LELYGRVGDETRQQQQQYQGALKARVVELELQRREAVDALKAKMDQSLRLEVQVEQLKNVVQSLSNTSATDDAALQWGDASTASTAATRTTDLSCLLRDTPGIHPSVMLMLHRTPWAEGVSEGIRKEEAVFEWQAKDSRGEWGSGQTSLPPELASLPAHPPGPLQELSPSPLPPPLLTSSGQLLSSPP-----------------SPDSDAGTFSWARGRRSPEPSHSRPDDRAVGVKEDGGXXXXXXGGKFERLRGKIGEAGAGLGAGGGRWGGGRGSSLVTDEAMTRRFVVGDVHLPSDHWEWVGGWMLDSETEASTDPDGWVYGYTPSVIAEKSRGNVIPRSD 516
            V LD+ER RADRL R + EE+EALS ELRDIMATV  G+D  G+        P+A+         +  + N   + +  I  +   N        G      P          A A  + I S+  +GR   G+             DD     + G      G+       +E E    +A    V   +     G   R+Q     GAL+ARVVELELQR EA D ++ K D+S+RLEVQVEQLKN+VQSLS+ S+ ++    WG  S+A+T    T DL  LLRD PG+ PSV+L+LHRTPWA+ V EGIRKEE+ FEWQ KDSRG W S   + P EL+SLP H       L+  P PPP        LSS P                 SP      F  A   R      +  D RA G++E           K       +  AG GLG G    GG  G  +VTDE +T RF + DV LPS HWEWVGGWM+DSETEAS+D DGW+YG +PS I+E + G     S+
Sbjct:   67 VNLDQERARADRLARERMEEEEALSGELRDIMATVTVGSDVFGT--------PAAAXXXXXXXPTSPAAGNDLSFDSESIERQQVANKTAVDKDPGQ----EPPXXXXXXXXXAIASASGIFSEWRLGRVRGGKAS-----------DDDRNGNNAGTGSGKTGAASETMTAEEQEKLKDSADGPGVDGQKSSSNGGGSAREQAV---GALRARVVELELQRAEAADEMREKTDRSIRLEVQVEQLKNIVQSLSHASSREETQA-WGQGSSATTRTQETVDLDPLLRDVPGVDPSVLLLLHRTPWADVVLEGIRKEESCFEWQGKDSRGAWSSRLGAFPTELSSLPLH------HLA-GPHPPPQXXXXXXXLSSLPQSXXXXXXXXXXXXRSRSPTLALTGFVTADHARCEAGGQAGSDARAGGLRE-----------KIGGAMAAVAAAGRGLGGG---IGGAPGWRMVTDEGVTFRFELDDVGLPSHHWEWVGGWMVDSETEASSDQDGWIYGRSPSEISEIALGRTSSHSN 553          
BLAST of mRNA_H-paniculata_contig10836.534.1 vs. uniprot
Match: D7FLV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV6_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.050e-32
Identity = 128/339 (37.76%), Postives = 164/339 (48.38%), Query Frame = 0
Query:    1 VLLDRERERADRLERAKHEEDEALSDELRDIMATVGRGADGIGSNGDAKSPS---PSASHQPPLPSTQTTGSSNGRGWVTTVIAGEPKTNWVGAVAAEGNGHSISPRDEKSPRAPAAEAVKTAISSDEDIGREIIGEGLLPLSGSIGGRGDDGGRRRSVGGSVSPRGSGGIDDGGDEVEPSTLAAGSDRVLELY------------GRVGDETRQQQQQYQGALKARVVELELQRREAVDALKAKMDQSLRLEVQVEQLKNVVQSLSNTSATDDAALQWGDASTASTAATRTTDLSCLLRDTPGIHPSVMLMLHRTPWAEGVSEGIRKEEAVFEWQAKD 324
            V LD+ER RADRL R + EE+EALS ELRDIMATV  G+D   +   A       P+A +  P  S                     +        A G     +P +        A A  + I S+  +GR              GGR  D  R  +  G+           GG +  P++                        G         ++Q  GAL+ARVVELELQR EA D ++ K D+S+RLEVQVEQLKN+VQSLS+ S+ ++    WG  S  +T    T DL  LLRD PG++PSV+L+LHRTPWA+ V EGIRKEEA FEWQ KD
Sbjct:   64 VNLDQERARADRLARERTEEEEALSGELRDIMATVTVGSDVSDTPAAAXXXXXXXPAAGNDLPFDSESI------------------ERQQAADKTAVGREPGQAPPEXXXXXXXXAIASASGIFSEWRLGRVR------------GGRATDDDRNGNNAGT-----------GGGKPGPASETKXXXXXXXXXXXXXXXXXXXQKGSXXXXXXXAREQAAGALRARVVELELQRAEAADEMREKTDRSIRLEVQVEQLKNIVQSLSHASSREETQ-GWGQGSATTTRIQGTVDLDPLLRDVPGVNPSVLLLLHRTPWADVVLEGIRKEEACFEWQGKD 360          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10836.534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRZ3_9PHAE8.460e-6839.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLV6_ECTSI1.050e-3237.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 234..254
NoneNo IPR availableCOILSCoilCoilcoord: 3..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10836contigH-paniculata_contig10836:369..6466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10836.534.1mRNA_H-paniculata_contig10836.534.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10836 369..6466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10836.534.1 ID=prot_H-paniculata_contig10836.534.1|Name=mRNA_H-paniculata_contig10836.534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=578bp
VLLDRERERADRLERAKHEEDEALSDELRDIMATVGRGADGIGSNGDAKS
PSPSASHQPPLPSTQTTGSSNGRGWVTTVIAGEPKTNWVGAVAAEGNGHS
ISPRDEKSPRAPAAEAVKTAISSDEDIGREIIGEGLLPLSGSIGGRGDDG
GRRRSVGGSVSPRGSGGIDDGGDEVEPSTLAAGSDRVLELYGRVGDETRQ
QQQQYQGALKARVVELELQRREAVDALKAKMDQSLRLEVQVEQLKNVVQS
LSNTSATDDAALQWGDASTASTAATRTTDLSCLLRDTPGIHPSVMLMLHR
TPWAEGVSEGIRKEEAVFEWQAKDSRGEWGSGQTSLPPELASLPAHPPGP
LQELSPSPLPPPLLTSSGQLLSSPPSPDSDAGTFSWARGRRSPEPSHSRP
DDRAVGVKEDGGGGGGGSGGKFERLRGKIGEAGAGLGAGGGRWGGGRGSS
LVTDEAMTRRFVVGDVHLPSDHWEWVGGWMLDSETEASTDPDGWVYGYTP
SVIAEKSRGNVIPRSDIPSNGSENTHQGHFFPGARPQNNPKNILDNKPRL
RRRRLVRTNQHGNSCAKTQPPGSYAASP
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