prot_H-paniculata_contig20452.5301.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20452.5301.1
Unique Nameprot_H-paniculata_contig20452.5301.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length85
Homology
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: A0A6H5KHF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF3_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 6.560e-27
Identity = 55/106 (51.89%), Postives = 62/106 (58.49%), Query Frame = 0
Query:    6 WEYDHDVLVVGGGIVGCTLACPCASGNRDPIPRP--------------------------PSIGLIEARPPVSLEAALAREGPDPRVYSITPASATLLKKVGVWDK 85
            WEYDHDVLVVGGGIVGCTLAC  A       P                            P++GLIEARPP SLEAALAR  PDPRVYS+ P+S  +L K+GVWD+
Sbjct:    3 WEYDHDVLVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDXXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSPDPRVYSLAPSSVEILGKLGVWDE 108          
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: D7G1J7_ECTSI (Ubiquinone Biosynthesis Monooxygenase COQ6 (C-terminal region) Ubiquinone Biosynthesis Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J7_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 8.800e-25
Identity = 56/108 (51.85%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    4 SSWEYDHDVLVVGGGIVGCTLAC-----------------PCASGNRD---------PIPRPPSIGLIEARPPVSLEAALAREGPDPRVYSITPASATLLKKVGVWDK 85
            + WEYDHDVLVVGGGIVGCTLAC                 P ++G  D              P++GLIEARPP SLEAALAR  PDPRVYS+ P+S  +L K+GVWD+
Sbjct:   40 AGWEYDHDVLVVGGGIVGCTLACRLAKDLSSTTPSTIGLPPLSTGKDDGXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGAPDPRVYSLAPSSVEILGKLGVWDE 147          
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: A0A835Z6E6_9STRA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E6_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.440e-14
Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    5 SWEYDHDVLVVGGGIVGCTLAC-----PCASGNRDPIPRPPSIGLIEARPPVSLEAALAREGPDPRVYSITPASATLLKKVGVW 83
            +W+YD+DVLVVGGGIVG  LAC     P A G+         IGL+E R P ++   +AR  PD RVY++ P+S   L  VG W
Sbjct:   30 AWDYDYDVLVVGGGIVGAALACKLAEIPKAGGSF-------KIGLVEGRAPPTVADVMARPTPDARVYTLAPSSVHFLDSVGAW 106          
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: W7U180_9STRA (Ubiquinone biosynthesis monooxygenase coq6 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U180_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.000e-12
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    4 SSWEYDHDVLVVGGGIVGCTLACPCAS--GNRDPIPRPPSIGLIEARPPVSLEAALAREG-PDPRVYSITPASATLLKKVGVWD 84
            S+  +D+DV+++GGGIVG +LAC  A   G R  +     I L+E RPP  L A LA +  PDPRVY++ PAS   L+ +G W 
Sbjct:   32 STDSWDYDVIILGGGIVGASLACSLAENVGQRHGM----KIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQ 111          
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: A0A7S2S5V6_9STRA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V6_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 6.180e-11
Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    3 QSSWEYDHDVLVVGGGIVGCTLACPCASGNRDPIPRPPSIGLIEARPPVSLEAALA-REGPDPRVYSITPASATLLKKVGVWD 84
             S   +DHDV VVGGG+VG   A   A  +   I +  +IG++E RPP  LE AL+    PD R Y++TP S   L+ +GVW 
Sbjct:   49 SSELNWDHDVTVVGGGVVGAAAAIRLAESS---IFQGSNIGVVETRPPPGLEEALSPATPPDVRTYAMTPGSEKFLRSLGVWQ 128          
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: UPI001FB17F5E (ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB17F5E)

HSP 1 Score: 65.5 bits (158), Expect = 1.570e-10
Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 0
Query:   10 HDVLVVGGGIVGCTLACPCASGNRDPIPRPPSIGLIEARPPVSLEAALAREGP-DPRVYSITPASATLLKKVGVW 83
            HD+++VGGG+VG  LAC  A+    P+ +  S+ +++  P +  E+++  E P DPRV +ITPAS + LK +G W
Sbjct:   54 HDIVIVGGGMVGMALACALAN---TPLTKHLSVAIVDKNPTLGKESSIRNEDPPDPRVSTITPASMSFLKDIGAW 125          
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: A0A5N6Q010_9ASTR (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q010_9ASTR)

HSP 1 Score: 63.5 bits (153), Expect = 7.550e-10
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 0
Query:   10 HDVLVVGGGIVGCTLACPCASGNRDPIPRPPSIGLIEARPPVSLEAALAR-EGPDPRVYSITPASATLLKKVGVWD 84
            HD+ +VGGG+VG  LAC  AS    P+ +  SI +I++ P +S    + + E PDPRV ++TPA+ +L K +G W+
Sbjct:   90 HDIAIVGGGMVGMALACSLASM---PLTKHLSIAIIDSNPALSNGPIIKKNEPPDPRVSTVTPATISLFKDIGAWE 162          
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: A0A5N6Q081_9ASTR (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q081_9ASTR)

HSP 1 Score: 63.5 bits (153), Expect = 7.670e-10
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 0
Query:   10 HDVLVVGGGIVGCTLACPCASGNRDPIPRPPSIGLIEARPPVSLEAALAR-EGPDPRVYSITPASATLLKKVGVWD 84
            HD+ +VGGG+VG  LAC  AS    P  +  SI +I++ P +S  + + + E PDPRV ++TPA+ +L K +G W+
Sbjct:  330 HDIAIVGGGMVGMALACSLASM---PFTKHLSIAIIDSNPALSNGSIIKKNEPPDPRVSTVTPATISLFKDIGAWE 402          
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: A0A7J7CWM1_TRIWF (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CWM1_TRIWF)

HSP 1 Score: 63.2 bits (152), Expect = 1.020e-9
Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   10 HDVLVVGGGIVGCTLACPCASGNRDPIPRPPSIGLIEARPPVSLEAALAREGP-DPRVYSITPASATLLKKVGVWD 84
            HD+ +VGGG+VG  LAC  A   R P+ +  ++ +I+  P +     + RE P DPRV ++TPA+ +L K +G W 
Sbjct:   52 HDIAIVGGGMVGMALACSLA---RMPLTKHLNVAIIDGNPTLGRRECIKREDPPDPRVSTVTPATISLFKDIGAWQ 124          
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Match: A0A2J6KEJ6_LACSA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KEJ6_LACSA)

HSP 1 Score: 62.0 bits (149), Expect = 2.610e-9
Identity = 30/76 (39.47%), Postives = 50/76 (65.79%), Query Frame = 0
Query:   10 HDVLVVGGGIVGCTLACPCASGNRDPIPRPPSIGLIEARPPVSLEAALAREGP-DPRVYSITPASATLLKKVGVWD 84
            HD+ +VGGG+VG  LAC  AS    P+ +  SI +I++ P ++   ++ ++ P DPRV ++TPA+ +L K +G W+
Sbjct:   55 HDIAIVGGGMVGMALACSLASM---PLTKHLSIAIIDSNPALTNMPSIKKDDPPDPRVSTVTPATISLFKGIGAWE 127          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20452.5301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHF3_9PHAE6.560e-2751.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1J7_ECTSI8.800e-2551.85Ubiquinone Biosynthesis Monooxygenase COQ6 (C-term... [more]
A0A835Z6E6_9STRA3.440e-1446.43Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
W7U180_9STRA2.000e-1245.24Ubiquinone biosynthesis monooxygenase coq6 n=1 Tax... [more]
A0A7S2S5V6_9STRA6.180e-1143.37Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
UPI001FB17F5E1.570e-1041.33ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
A0A5N6Q010_9ASTR7.550e-1042.11Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
A0A5N6Q081_9ASTR7.670e-1042.11Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
A0A7J7CWM1_TRIWF1.020e-939.47Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
A0A2J6KEJ6_LACSA2.610e-939.47Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 8..85
e-value: 1.2E-15
score: 59.3
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 10..84
NoneNo IPR availablePANTHERPTHR43876FAMILY NOT NAMEDcoord: 9..85
NoneNo IPR availablePANTHERPTHR43876:SF7UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIALcoord: 9..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20452contigH-paniculata_contig20452:1191..1493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20452.5301.1mRNA_H-paniculata_contig20452.5301.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20452 1191..1493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20452.5301.1 ID=prot_H-paniculata_contig20452.5301.1|Name=mRNA_H-paniculata_contig20452.5301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp
MIQSSWEYDHDVLVVGGGIVGCTLACPCASGNRDPIPRPPSIGLIEARPP
VSLEAALAREGPDPRVYSITPASATLLKKVGVWDK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf