mRNA_H-paniculata_contig20301.5253.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20301.5253.1
Unique NamemRNA_H-paniculata_contig20301.5253.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: D7FQ75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ75_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 2.680e-87
Identity = 157/275 (57.09%), Postives = 183/275 (66.55%), Query Frame = 1
Query:    1 IEHNYAKDTLRDIILQTIAAGHSNDEG-GTFARYWLSAGRGYRAANHKILSLLPFYVLVMDLHGHASEGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTTMLRAFAFLPTNVQ---------------DGILTSFKFSPIHASELVKAKEVLILGRGGIISVVRIDGTNVG--------DGG----GKDNDPKPGPVFRILRKMLAADMKTDEFTDTVPYEQYE 741
            IEH+Y K+ LRDIIL TIAAG  +  G   FA++WLSAGRG    + +      FYV+V D  GH SEG++EWVV+VP K+GLM S KTNNYLLNAL  MESQ     +EGIWVND GNVAETCMGNVAIV+Q G LRSP Y GSILAGTT+LR FAF P  +Q               DG+LTSFKF  + ASEL +AKE+L+ G GG+ SVV I+G  VG        DG     GK    KPGPVF  LR++LAADM+  EFTD VPYE YE
Sbjct:   96 IEHSYTKEALRDIILATIAAGGRSKNGMDAFAKFWLSAGRGDFMVSPRGCGDAIFYVVVTDFPGHPSEGIEEWVVKVPMKTGLMASCKTNNYLLNALTAMESQDK-GGMEGIWVNDAGNVAETCMGNVAIVDQGGVLRSPHYDGSILAGTTLLRVFAFAPQLIQVETGRVAKPVIFSAWDGLLTSFKFDFVRASELEEAKEILLCGGGGVTSVVSINGITVGRVKKETIGDGTSAETGKAEAAKPGPVFWALRELLAADMEGAEFTDAVPYELYE 369          
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: W7T1D5_9STRA (Aminotransferase, class IV n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T1D5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.860e-37
Identity = 96/250 (38.40%), Postives = 146/250 (58.40%), Query Frame = 1
Query:   13 YAKDTLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILSLLPFYVLVMDLHGHAS------EGVQEWVVE-VPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTTMLRAFAF-LPTNVQDGILTSFKFSPIHASELVKAKEVLILGRGGIISVVRIDGTNVGDGGGKDNDPKPGPVFRILRKMLAADMKTDEFTDTVPYEQY 738
            + K+ LR IIL T+AA    D+   F R+W+++GRG  A + K  +   F+V+V   H + S      +G+ E VVE +P K+ L+ + K+ NYL+NAL    ++     + GI     G +AE+ +GNVAI+ Q G LR+PP+   ILAGTT+ R +   + + +  GI++  ++  I  +EL+ AKE   LG G ++ +VRIDG  +GDG       KPGPVF+ L  +L  DM  + F D VPY++Y
Sbjct:  110 FTKEELRHIILSTVAASQVRDD--IFVRFWMTSGRGNFAISAKETTSSGFFVMV---HRYPSKGDLKLQGITEHVVEDIPLKNPLLATMKSTNYLINALVCQAAEDKGGFL-GIQFEPSGALAESSIGNVAILTQEGVLRTPPFE-RILAGTTVKRLWELAVDSLLPQGIVSGVEYHQITLAELLSAKEAFSLGGGSVLPIVRIDGHVIGDG-------KPGPVFKELDALLVRDMDVN-FLDPVPYQEY 344          
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: A0A0F9KA98_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9KA98_9ZZZZ)

HSP 1 Score: 102 bits (255), Expect = 3.720e-22
Identity = 77/228 (33.77%), Postives = 112/228 (49.12%), Query Frame = 1
Query:   25 TLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILSLLPFYVLVMDLH----GHASEGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTTMLRAFAFLPTNVQDGILTSFKFSPIHASELVKAKEVLILGRGGIISVVRIDGTNVGDGGGKDNDPKPGPVFRILRKMLAADM 696
            T++ I L+T+A   + D G    R ++S G G    +        FYV+V+ +     G   EGV      VP K G     KT  YLLNAL  +E+    +   GIW + +G++AE     VAIVNQ   L+ P +   IL GT ++R        V+ G L     + I   E+ ++ E+L+LG G +I VV+ DG ++G G       KPGPV R L ++   DM
Sbjct:   97 TIKQIALETVAIAGAKDCG---VRLFVSRGLGDFECDPTTPKKSLFYVIVLGMKLADTGIPPEGVSAITTHVPIKPGFYAQVKTTCYLLNALVHLEAHRNNASF-GIWYDQEGHLAEASTSCVAIVNQEKILKYPRFE-HILKGTGLIRGVELAKELVKSGELKGISQTDITQHEVYESSEMLVLGSGRVIPVVKYDGRSIGSG-------KPGPVSRRLWELFQKDM 312          
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: A0A6I1QNP5_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6I1QNP5_9DELT)

HSP 1 Score: 100 bits (250), Expect = 1.920e-21
Identity = 78/248 (31.45%), Postives = 124/248 (50.00%), Query Frame = 1
Query:   13 YAKDTLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILSLLPFYVLVMDLHGHAS----EGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTTMLRAFAFLPTNVQDGILTSFKFSPIHASELVKAKEVLILGRG-GIISVVRIDGTNVGDGGGKDNDPKPGPVFRILRKMLAADMKT--DEFTDTVPYEQ 735
            ++++ LR IIL T AA    D      RYWLSAG G         +   FYV+V     +      +G++    +VP K  L    K+ NYL N L  +E++   +   G++++ +G VAE+   NVA V Q   LR PP+  ++L+G T+ R   F    VQ G L + + + I   E  +A E++++G    +  V+  DG  +GDG       KPGP+ + L +M   D ++  D+    VPY++
Sbjct:   94 FSRERLRRIILATAAASRQRDGS---VRYWLSAGPGGYGLGPAECAGSSFYVIVFKQEAYPESYYQQGIKLITSQVPIKPPLFARIKSTNYLPNVLVVLEAKDRGAD-NGVFIDQRGMVAESSNMNVAFVTQDRVLRHPPFE-AVLSGITIKRVLDFAQRLVQQGALKALRIADIPVEEGREAIEMMLIGSSIKVAPVIEWDGQKIGDG-------KPGPITKKLLEMWNEDARSAKDQLV-AVPYDE 328          
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: A0A2K1KQK5_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KQK5_PHYPA)

HSP 1 Score: 98.6 bits (244), Expect = 3.530e-20
Identity = 83/249 (33.33%), Postives = 124/249 (49.80%), Query Frame = 1
Query:    1 IEHNYAKDTLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILSLLPFYVLVMDLHGHASEGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTT---MLRAFAFLPTNVQDGILTSFKFSPIHASELVKAKEVLILGRGGII-SVVRIDGTNVGDGGGKDNDPKPGPVFRILRKMLAADMK--TDEFTDTVPY 729
            I+  + + TLRDI++QT+AA  S    G   RYWLSAG G  A + K      FY +V D      EGV+     +P K     + K+ NYL N L  +E++    +  GIW++++G +AE    NVAI+   G L  PP+  ++LAG T   M+   + L  N     L   K   I   E   A E++++G G ++ S+V  DG  VG G       K GP+   +R+ +  D++  T     +VPY
Sbjct:  176 IQSPFDRATLRDILVQTVAA--SGCRRGAL-RYWLSAGLGGFALSSKECFKSTFYAIVTDNTYQGPEGVKVMTSTIPIKPPFFATVKSVNYLPNVLAQLEAEEKGLYA-GIWLDNEGFIAEGPNMNVAILGSDGVLLIPPFD-NVLAGCTARRMIELVSRLIDNKSIQNLNGVKVQMISVEEARSASEMMLIGSGVLVKSIVEWDGQPVGTG-------KVGPLTLAIRQAVQNDLEDLTTGKLVSVPY 412          
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: A0A535BKY2_9DELT (D-amino-acid transaminase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A535BKY2_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 3.650e-19
Identity = 79/248 (31.85%), Postives = 123/248 (49.60%), Query Frame = 1
Query:   13 YAKDTLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILSLLPFYVLVMDLH----GHASEGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTTMLRAFAFLPTNVQDGILTSFKFSPIHASELVKAKEVLILGRG-GIISVVRIDGTNVGDGGGKDNDPKPGPVFRILRKMLAADMKT--DEFTDTVPYEQ 735
            + ++ LR IIL T AA     EG    RYWLSAG G             FYV+V +       + ++G++     +P K  L    K+ NYL N L  +E++   S   GI+++ +G VAE+   NVA V +    R P +  +IL+G T+ R   F    VQ G L   + + +  SE  +A E++++G    I  VV  DG  +GDG       KPGP+ ++L ++   D+++  D+    VPY +
Sbjct:   97 FPREELRQIILDTAAASRQR-EGSV--RYWLSAGPGGFGLGPAECVGSSFYVIVFNQELYPASYYTDGMKVITSNIPIKPPLFARIKSTNYLPNVLVVLEAKDR-SADNGIFIDQRGMVAESSNMNVAFVTKDRVFRHPVFD-AILSGITIQRVLQFAERLVQQGDLKEIRLADVSVSEGREAAEMMLIGSSIKIAPVVEWDGRPIGDG-------KPGPIAKMLLQLWEEDVRSAADQLV-RVPYPE 331          
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: A9SPS3_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SPS3_PHYPA)

HSP 1 Score: 93.2 bits (230), Expect = 9.940e-19
Identity = 74/212 (34.91%), Postives = 108/212 (50.94%), Query Frame = 1
Query:    1 IEHNYAKDTLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILSLLPFYVLVMDLHGHASEGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTT---MLRAFAFLPTNVQDGILTSFKFSPIHASELVKAKEVLILGRGGII-SVVRIDGTNVGDG 624
            I+  + + TLRDI++QT+AA  S    G   RYWLSAG G  A + K      FY +V D      EGV+     +P K     + K+ NYL N L  +E++    +  GIW++++G +AE    NVAI+   G L  PP+  ++LAG T   M+   + L  N     L   K   I   E   A E++++G G ++ S+V  DG  VG G
Sbjct:   61 IQSPFDRATLRDILVQTVAA--SGCRRGAL-RYWLSAGLGGFALSSKECFKSTFYAIVTDNTYQGPEGVKVMTSTIPIKPPFFATVKSVNYLPNVLAQLEAEEKGLYA-GIWLDNEGFIAEGPNMNVAILGSDGVLLIPPFD-NVLAGCTARRMIELVSRLIDNKSIQNLNGVKVQMISVEEARSASEMMLIGSGVLVKSIVEWDGQPVGTG 267          
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: A0A534UMV6_9DELT (D-amino-acid transaminase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534UMV6_9DELT)

HSP 1 Score: 93.2 bits (230), Expect = 1.350e-18
Identity = 80/248 (32.26%), Postives = 121/248 (48.79%), Query Frame = 1
Query:   13 YAKDTLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILSLLPFYVLVMDLHGHAS----EGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTTMLRAFAFLPTNVQDGILTSFKFSPIHASELVKAKEVLILGRG-GIISVVRIDGTNVGDGGGKDNDPKPGPVFRILRKMLAADMKT--DEFTDTVPYEQ 735
            + ++ LR IIL+T AA     EG    RYWLSAG G             FYV+V     +      +G++    +VP K  L    K+ NYL N L  +E++   +   G++++ +G VAE+   NVA V +    R PP+  +IL+G T+ R   F    VQ G+L + + + I   E   A E++++G    I  VV  DG  +GDG       KPG V   L +M   D ++  D+    VPY++
Sbjct:   97 FPRERLRQIILETAAAS-GRHEGSV--RYWLSAGPGGYGLGPAECVGSSFYVIVFKQEAYPESYYQQGIKLITSQVPIKPPLFARIKSTNYLPNVLVVVEAKDRGAD-NGVFIDQRGMVAESSNMNVAFVTKDRVFRHPPFD-AILSGITIQRVLDFAQRLVQQGVLKAVRLAGIPVEEGRDAAEMMLIGSSIKIAPVVEWDGQKIGDG-------KPGLVTTKLLEMWNEDARSAQDQLV-AVPYDE 331          
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: A0A5A7PLN3_STRAF (D-alanine aminotransferase n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PLN3_STRAF)

HSP 1 Score: 94.0 bits (232), Expect = 1.790e-18
Identity = 73/241 (30.29%), Postives = 119/241 (49.38%), Query Frame = 1
Query:   13 YAKDTLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILSLLPFYVLVM--DLHGHASEGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTTMLRAFAFLPTNVQDGILTSFKFSPIHASELVKAKEVLILGRGGIIS-VVRIDGTNVGDGGGKDNDPKPGPVFRILRKMLAADMKTDEFTDTVP 726
            + K T+R I+++TI+     +  G+  RYWLS+G G    +         Y ++M      H+  G++     +P KS      K+ NYL N L  ME++   ++  GIW++++G VAE    NVA V +A  L  P +   IL+G T  R        V +G++   +   +   E  KA+E++++G G  +  VV+ D   +GDG    N+   GPV   L K+L  DM++   T  +P
Sbjct:  200 FDKQTIRKILIKTISTSKCRE--GSL-RYWLSSGPGDFLLSPSSCHCPTLYAIIMCGTTQSHSQRGIKVITSSIPIKSPQFAVMKSVNYLPNVLTKMEAEDREAYA-GIWLDERGYVAEGPNMNVAFVTEARELLMPRFD-RILSGCTAKRVLELAKGLVGEGMIEGVRVDDVAVEEGRKAQEMMLIGSGTYVRPVVQWDDQVIGDGEEFGNE---GPVTLALLKLLLEDMRSGPDTVRIP 432          
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Match: A0A534STA0_9DELT (D-amino-acid transaminase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534STA0_9DELT)

HSP 1 Score: 90.9 bits (224), Expect = 9.600e-18
Identity = 75/232 (32.33%), Postives = 111/232 (47.84%), Query Frame = 1
Query:   13 YAKDTLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILSLLPFYVLVMDLHGHAS----EGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDMESQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTTMLRAFAFLPTNVQDGILTSFKFSPIHASELVKAKEVLILGRG-GIISVVRIDGTNVGDGGGKDNDPKPGPVFRILRKMLAAD 693
            + +  LR IIL+T AA     EG    RYWLSAG G             FYV+V     +      EGV+    +VP K  L    K+ NYL N L  +E++   +   G++++ +G VAE+   N+A V +    R PP+  +IL+G T+ R   F    VQ G L + + + I   E   A E++++G    +  VV  D   +GDG       +PGPV + L +M   D
Sbjct:   99 FTRQRLRQIILETAAASRQR-EGSV--RYWLSAGPGGYGLGPAECVGSSFYVIVFKQEAYPESYYQEGVKLITSQVPIKPPLFARIKSTNYLPNVLVVLEAKDRGAD-NGVFIDQRGMVAESSNMNLAFVTKDRVFRHPPFD-AILSGITIQRVLDFAQRLVQQGALVAVRLADIPVEEGHAAAEMMLIGSSIKVAPVVEWDEKKIGDG-------RPGPVTKKLLEMWNED 318          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20301.5253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FQ75_ECTSI2.680e-8757.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7T1D5_9STRA1.860e-3738.40Aminotransferase, class IV n=2 Tax=Monodopsidaceae... [more]
A0A0F9KA98_9ZZZZ3.720e-2233.77Uncharacterized protein n=1 Tax=marine sediment me... [more]
A0A6I1QNP5_9DELT1.920e-2131.45Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A2K1KQK5_PHYPA3.530e-2033.33Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A535BKY2_9DELT3.650e-1931.85D-amino-acid transaminase n=1 Tax=Deltaproteobacte... [more]
A9SPS3_PHYPA9.940e-1934.91Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A534UMV6_9DELT1.350e-1832.26D-amino-acid transaminase n=1 Tax=Deltaproteobacte... [more]
A0A5A7PLN3_STRAF1.790e-1830.29D-alanine aminotransferase n=1 Tax=Striga asiatica... [more]
A0A534STA0_9DELT9.600e-1832.33D-amino-acid transaminase n=1 Tax=Deltaproteobacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20301contigH-paniculata_contig20301:60..2687 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score275.8
Seed ortholog evalue2e-71
Seed eggNOG ortholog2880.D7FQ75
KEGG rclassRC01843,RC02148
KEGG koko:K18482
KEGG ReactionR05553
KEGG Pathwayko00790,map00790
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008153,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0019438,GO:0019752,GO:0032787,GO:0042537,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046482,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.branched-chain-amino-acid transaminase activity
EggNOG OGsCOG0115@1,KOG0975@2759
EC4.1.3.38
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size747
Cds size747
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929527.150004-CDS-H-paniculata_contig20301:59..1751622929527.150004-CDS-H-paniculata_contig20301:59..175Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 60..175 +
1691480899.2944171-CDS-H-paniculata_contig20301:59..1751691480899.2944171-CDS-H-paniculata_contig20301:59..175Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 60..175 +
1622929527.1602004-CDS-H-paniculata_contig20301:326..3671622929527.1602004-CDS-H-paniculata_contig20301:326..367Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 327..367 +
1691480899.3050272-CDS-H-paniculata_contig20301:326..3671691480899.3050272-CDS-H-paniculata_contig20301:326..367Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 327..367 +
1622929527.1706228-CDS-H-paniculata_contig20301:648..8101622929527.1706228-CDS-H-paniculata_contig20301:648..810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 649..810 +
1691480899.313784-CDS-H-paniculata_contig20301:648..8101691480899.313784-CDS-H-paniculata_contig20301:648..810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 649..810 +
1622929527.1862535-CDS-H-paniculata_contig20301:1497..16451622929527.1862535-CDS-H-paniculata_contig20301:1497..1645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 1498..1645 +
1691480899.3230364-CDS-H-paniculata_contig20301:1497..16451691480899.3230364-CDS-H-paniculata_contig20301:1497..1645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 1498..1645 +
1622929527.1970487-CDS-H-paniculata_contig20301:2040..20571622929527.1970487-CDS-H-paniculata_contig20301:2040..2057Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 2041..2057 +
1691480899.3329306-CDS-H-paniculata_contig20301:2040..20571691480899.3329306-CDS-H-paniculata_contig20301:2040..2057Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 2041..2057 +
1622929527.2087765-CDS-H-paniculata_contig20301:2102..23091622929527.2087765-CDS-H-paniculata_contig20301:2102..2309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 2103..2309 +
1691480899.3426683-CDS-H-paniculata_contig20301:2102..23091691480899.3426683-CDS-H-paniculata_contig20301:2102..2309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 2103..2309 +
1622929527.2198377-CDS-H-paniculata_contig20301:2631..26871622929527.2198377-CDS-H-paniculata_contig20301:2631..2687Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 2632..2687 +
1691480899.3511682-CDS-H-paniculata_contig20301:2631..26871691480899.3511682-CDS-H-paniculata_contig20301:2631..2687Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20301 2632..2687 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20301.5253.1prot_H-paniculata_contig20301.5253.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20301 60..2687 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20301.5253.1

>prot_H-paniculata_contig20301.5253.1 ID=prot_H-paniculata_contig20301.5253.1|Name=mRNA_H-paniculata_contig20301.5253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp
IEHNYAKDTLRDIILQTIAAGHSNDEGGTFARYWLSAGRGYRAANHKILS
LLPFYVLVMDLHGHASEGVQEWVVEVPKKSGLMVSYKTNNYLLNALNDME
SQVCISHIEGIWVNDKGNVAETCMGNVAIVNQAGALRSPPYGGSILAGTT
MLRAFAFLPTNVQDGILTSFKFSPIHASELVKAKEVLILGRGGIISVVRI
DGTNVGDGGGKDNDPKPGPVFRILRKMLAADMKTDEFTDTVPYEQYEA*
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mRNA from alignment at H-paniculata_contig20301:60..2687+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20301.5253.1 ID=mRNA_H-paniculata_contig20301.5253.1|Name=mRNA_H-paniculata_contig20301.5253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2628bp|location=Sequence derived from alignment at H-paniculata_contig20301:60..2687+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTGAACATAATTACGCCAAGGACACTCTAAGAGATATCATTCTCCAAAC CATTGCCGCTGGACATAGCAACGACGAGGGGGGCACTTTCGCCAGGTATT GGCTGAGCGCGGGGAGGTAATCGCTGAGGGTGCATTGAACATAATTACGC CAAGGACATTCGAAGAGATACCATTCTCCAAACCATTGCTACTGGAGGTC GCAACGACGAGGGGGGCACTTTCGCCAGGTATTGGCTGAGCGCGGGGAGC TAATCGCTGAAGCACAGGGGGTATCGCGCAGCAAATCACAAAATACTTAG CTTACTTCGTCGCGTGAAATCACTGACAACAAGCGTAATTAATACCAGAG AATCCAGATAGATGGATAATTCTCGAACGTTAACACGCACTTCTTGTTTT ATCCTCATTATTTATCAGACGTTTACCAGCTTACGTTTTTTTTCTCAATT GTATGCATCGTTTATTGTTTGGTAATGGCATGATAAGAACATCTTTATTC TGCCCCCAGCGGTGGCATGTGTGATCGACTACGTTGACCTGACATATGCA ATCAACTGTACATCGCTCCACGTGGGTGCACACGGGCAGCTTTTTATGTT TTAGTCATGGATTTACATGGCCACGCTAGCGAGGGCGTGCAGGAGTGGGT AGTGGAAGTACCCAAGAAGTCCGGGCTTATGGTCTCGTACAAGACCAATA ACTACTTGCTCAACGCTCTCAACGATATGGAATCACAGGTTTGCATATCA CGTCTATCTCTCTGTTGCAGAAAATTTGCGAATACTATACTATTTCGAAC ATCCGTAACTCTTACCATACCCACCATCTGGAATGTACAGCAGCGTACCC CAGCCCACCCCTTTGTACCCTAGTTGATATGAATCCAATCAGATGACAGC GAATTTCAACCCGAAAGATTTCACAAACTCACCCCTCAAGCGTTTGCCGT TGAAGCAGATTCTATGGGGGATAGCCCCCAACCACGTCCACTTACCTTTT GACGAATGTTGAGAAGTGTTTGACCCATCAATAACTGATTTTTTCTCAGC TCCTTATAATCACAGCCCCCTTGCAGAGCGGAAAGACCGCAAGGTCGAGG GTTAAGTCTGAACACGTCAGAATCAACTCCCCGGTACACCGTAACTGGGA AACGCATGAATATCTCTGCTTTGTGGGCGACCAATTGACCCGTGGAATGC TACCACGTGGGTTTAAATAAAAGAGTAGAATGGTTTTAATAGATATCGCT AGATTATGTGTTTCACTACCTATTTTATCCTTTGGTGTCCCAGCGCATCG GTTTAAAAATGCAGCGCAGAGGGGGAGGGCGATCACAAAAACTAAGCAGA TGGTTCGTACTGCGAGTATTATTATTTTCCGTCAAGTAGTAGCTGACGTG TCATTTTTCGCACTGTTTTATCATGCAGGACAAATGAGACATAGAGGGCA TTTGGGTCAACGATAAGGGAAATGTGGCAGAGACCTGCATGGGGAACGTG GCGATCGTCAACCAAGCTGGGGCGCTCAGGAGCCCTCCCTACGGCGGCAG CATTTTGGCCGGTACTACCATGTTACGGGCGTTCGCGTGGTTCCTAAACT TATCAAGGCAAGCAAGAAACTCACGCATTCGTTGACTAATGTGGCTATGC GAGCAATACAGATCTCATTGTGGGTATGTTTAGATGTGCGTCGTCTCGGT TCCTCAGGGAAGGTTACATATCAATATTCTACAAGTAGGATGATGATTGT TCAAGTGCGTCGCGGGTTTTGGTCATAGGATTGACAATTGGTATCCGCGA ACATATCGGCGAGCGCGTGAGCGTGCCAATGTCCTACATGCGTGCATGCC GACGCGGAGCTCAGCGCAATGAATAGATGAAAAACACATCATCTCGTGTT ACTGTAGGTGATGTAGCCGAAGCACCGAGTATCTTCGTCAGAAGCTCATA GTGTCGCCGACGCTTCTATCGTTTATGCGAGTTTTCTCCCAACAAACGGT ACAACTATGATCTCTCTGATGCTGACGGTCATTTCTGTATGAGTCCAGGA CGGAATTCTCACGTCCTTCAAGTTCTCGCCGATACACGCATCCGAGTTGG TCAAGGCAAAAGAAGTGCTTATTTTGGGCAGAGGAGGCATTATCTCTGTC GTAAGGATAGACGGAACGAATGTCGGCGATGGAGGGGGAAAAGATAACGA TCCCAAGCCGGGACCGGTTTTCCGTATCCTGCGCAAGATGCTTGCAGCAG GTGAATTGATTTTTTTGTGCAGTACCACAAATTGTGAACAGGGTCCAACA ACATCTGAGAGATGGAATGGCTGCAGCTGCCACGCGACGGATGACTGTCG TTTAACTTTGCGAGTGGCGATACGCGGGTAGTAGGCACACGACTTGGGCA TCTGGGTCGACGACTGGGATGTATCGTGATACAACGTAGTGGGAGAAGGT TGACATGGTCTTTTTCATGACGTATCGTACTGAGTAAATTTAGTACCGAA TTTTCATTTTTCCGGGCATTCCACCCATCAACTTCCGGCCGCCGTTATTT TGCTCGATCATTACCTGGTTAGACATGAAGACGGACGAATTCACGGACAC GGTACCATACGAGCAATACGAAGCCTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig20301:60..2687+

>mRNA_H-paniculata_contig20301.5253.1 ID=mRNA_H-paniculata_contig20301.5253.1|Name=mRNA_H-paniculata_contig20301.5253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at H-paniculata_contig20301:60..2687+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTGAACATAATTACGCCAAGGACACTCTAAGAGATATCATTCTCCAAAC
CATTGCCGCTGGACATAGCAACGACGAGGGGGGCACTTTCGCCAGGTATT
GGCTGAGCGCGGGGAGATTGAACATAATTACGCCAAGGACACTCTAAGAG
ATATCATTCTCCAAACCATTGCCGCTGGACATAGCAACGACGAGGGGGGC
ACTTTCGCCAGGTATTGGCTGAGCGCGGGGAGGGGGTATCGCGCAGCAAA
TCACAAAATACTTAGCTTACTTCGGGGTATCGCGCAGCAAATCACAAAAT
ACTTAGCTTACTTCCTTTTTATGTTTTAGTCATGGATTTACATGGCCACG
CTAGCGAGGGCGTGCAGGAGTGGGTAGTGGAAGTACCCAAGAAGTCCGGG
CTTATGGTCTCGTACAAGACCAATAACTACTTGCTCAACGCTCTCAACGA
TATGGAATCACAGGTTTGCATATCACCTTTTTATGTTTTAGTCATGGATT
TACATGGCCACGCTAGCGAGGGCGTGCAGGAGTGGGTAGTGGAAGTACCC
AAGAAGTCCGGGCTTATGGTCTCGTACAAGACCAATAACTACTTGCTCAA
CGCTCTCAACGATATGGAATCACAGGTTTGCATATCACACATAGAGGGCA
TTTGGGTCAACGATAAGGGAAATGTGGCAGAGACCTGCATGGGGAACGTG
GCGATCGTCAACCAAGCTGGGGCGCTCAGGAGCCCTCCCTACGGCGGCAG
CATTTTGGCCGGTACTACCATGTTACGGGCGTTCGCACATAGAGGGCATT
TGGGTCAACGATAAGGGAAATGTGGCAGAGACCTGCATGGGGAACGTGGC
GATCGTCAACCAAGCTGGGGCGCTCAGGAGCCCTCCCTACGGCGGCAGCA
TTTTGGCCGGTACTACCATGTTACGGGCGTTCGCTTTTCTCCCAACAAAC
GTTTTCTCCCAACAAACGTCCAGGACGGAATTCTCACGTCCTTCAAGTTC
TCGCCGATACACGCATCCGAGTTGGTCAAGGCAAAAGAAGTGCTTATTTT
GGGCAGAGGAGGCATTATCTCTGTCGTAAGGATAGACGGAACGAATGTCG
GCGATGGAGGGGGAAAAGATAACGATCCCAAGCCGGGACCGGTTTTCCGT
ATCCTGCGCAAGATGCTTGCAGCAGTCCAGGACGGAATTCTCACGTCCTT
CAAGTTCTCGCCGATACACGCATCCGAGTTGGTCAAGGCAAAAGAAGTGC
TTATTTTGGGCAGAGGAGGCATTATCTCTGTCGTAAGGATAGACGGAACG
AATGTCGGCGATGGAGGGGGAAAAGATAACGATCCCAAGCCGGGACCGGT
TTTCCGTATCCTGCGCAAGATGCTTGCAGCAGACATGAAGACGGACGAAT
TCACGGACACGGTACCATACGAGCAATACGAAGCCTGAACATGAAGACGG
ACGAATTCACGGACACGGTACCATACGAGCAATACGAAGCCTGA
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