prot_H-paniculata_contig2025.5235.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2025.5235.1
Unique Nameprot_H-paniculata_contig2025.5235.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length770
Homology
BLAST of mRNA_H-paniculata_contig2025.5235.1 vs. uniprot
Match: A0A6H5LKJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKJ8_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 3.040e-14
Identity = 263/888 (29.62%), Postives = 356/888 (40.09%), Query Frame = 0
Query:   18 ASGVIDAVEGSAIRDFKGGRTNSAKRSKKT-EATVLWSPGKRGREGPSVVGDGKGDTGIGGSINGNSSGLKRYGVAGSTRDVGGRSLASLARAFKERHGEDLRLDEEDDTEETXXXXEPAMSTRRIKRDRSRSGDHTTVAAAATAATMSPAKLAAEIQRARARAREERFGGGSQLR----------PAKGLR-------------------VASLPEKGASGGMAKVQAMAATAAIIASNRSSTEVE----LFGTTVPKSSESSTAPDIANASSTSSAVPLAVVPAAVRISPTGGAMTNVPVPSVHSVSQXXXXXXXXXXXXXXXXKQVSALETVGAEKSSEKDTPASSVPATQRTTSGAGSTSIQTPAVAKKSWPRQHSISF---------------------------NSHQTPKTAPKVLTLRLRLRDDAPAE---PKPQPPEPTV--DGGVEESKGFDPXXXXXXXXXXXXXXXXXXXXXXASAVVSTAASHSTAAYPLSTG---------------------------GGSVPVPVATGRAPLCPGVSATNTRGSTP---SRPRT------GFWGPSFGIEAVGSASVGGPAAAVVRVNPSTPPAP-----NPWIISPDAPTFAKNQGRPLSRS-SSHSSPSTG-----------------------ISSTRSGESAASYPARAVPENARTAATDQVGHGVGSGETEGAEVGGKEVSHGDSGTADGAGI-PGHLSKKQGSAFLAGSVGGPRCTQP---AGVATGLSRQEDGLGGQGQEHPAQYVARLLDAQQRNTEQHNTTRQRDSTAAGQIMGSAGSLAAESSRGNEAVVGTKRGERARVGG-ILQGVRVGGGAKELLERLKREREESLELERKLTQALLDL 769
            A+GV +    SA+   +   ++ A +  KT E  VLWSPGK   +GP    + +     GG  NG               DV  ++L+ LA+ FKER+GE++  D  DD ++          T + K  R   G          A +MSPA+LAAE Q+ARARARE                    PA   R                   ++ +P   A+GG          AA+  ++  + + +    +  T  PK S  +  P      S++ + P AV P A   +P G      P+ + ++ +                   V AL T  AEK    D  A+S     +T S A + +IQ  A+     P                                  +S   P T  K+ TLRLRLR D  A+   P P  P P     GG EE K F+P    XXXXXXXXXXXXXXXXX  +A VS+  S  +     STG                               P P+AT   P     +A  +R S P   S PR       G WGPSFGI        G PA A      S+P        NPWI+SP++PTF +N+GRPL+++    S P+ G                        S+TRS   AAS     V  ++R+++      G G G   G   G     +G   T   AG  P   S + G+     +      T P   AG + G++ Q     GQ           LL  ++             S A   + GSA   AAE++ G +A      G  A  GG ++ GVR+GG A ELLERLKREREESL+ ERKLTQAL+DL
Sbjct:   17 AAGVGNGNAPSAVSKAQRRASSRANKKAKTGEPGVLWSPGKG--KGP----EDRASLDTGGGRNG---------------DV--QNLSVLAKNFKERYGEEV--DAPDDDDDGMTTGSSVFETPKRK-GRLSGGAKPRTPVEEAARSMSPARLAAEAQKARARAREXXXXXXXXXXXXSFSKPPSSPAPSARPFPVGEPPDAPLGAPPPAAMSKVPMNRAAGGHGDKNRKGTNAAVTTTSSQAQQPQGGKGIASTAAPKDSTPANGPG----GSSNGSAPTAVSPMA---APKGATS---PISATNAAAA------------------VPALVTPDAEK---VDASAAS-----KTGSRAAAITIQAEAIPMDETPAAXXXXXXXXXXXXXXXXXXXXXXXXVKKVLTLPSSQSPPSTGGKIHTLRLRLRTDLVADSKQPAPAAPSPATAAGGGAEERKSFEPPTPPXXXXXXXXXXXXXXXXXKKAATVSSVGSKPSPVAAPSTGIKKPSVASISTVASAAPAXXXXXXXXXXXXAPAPLATATTP-----TAVASRLSIPPEGSSPRNLALTLQGSWGPSFGIP-------GAPAGAPPPTPASSPDVAAANKTNPWILSPESPTFGRNRGRPLAQAFPKPSQPTRGSXXXXXXXXXXXXXXXXXRAAGLASATRSAGEAAS-----VQPDSRSSSG-----GCGDG---GIREGRALRGNGTPATPRPAGTTPCRASPQGGTRGADVANSSSPLTHPLPRAGASAGMNAQPPLSYGQS--------GGLLPPERAXXXXXXXXXXXXSLACWPV-GSALDAAAETATGTDA------GAAAASGGFVVLGVRMGGKAAELLERLKREREESLDFERKLTQALMDL 802          
BLAST of mRNA_H-paniculata_contig2025.5235.1 vs. uniprot
Match: D8LQA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA6_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.160e-6
Identity = 69/181 (38.12%), Postives = 92/181 (50.83%), Query Frame = 0
Query:   16 KRASGVIDAVEG-------SAIRDFK---GGRTNSAKRSKKTEATVLWSPGKRGREGPSVVGDGKGDTGIGGSINGNSSGLKRYGVAGSTRDVGGRSLASLARAFKERHGEDLRLDEEDDTEETXXXXEPAMSTRRIKRDRSRSGDHTTVAAAATAATMSPAKLAAEIQRARARAREERFG 186
            KRA+G  DA  G       SA+ + +   G R N  K++K  E  VLWSPGK   +GP    +G+     GG  NG               DV   +L+ LA+ FKER+GE++   ++DD +          + +R  R    +   T V  AA   +MSPA+LAAE QRARARAREERFG
Sbjct:   40 KRAAGSADAAAGVGNGNAPSAVSNAQRRAGSRAN--KKAKTGEPGVLWSPGKG--KGP----EGRASLDTGGWRNG---------------DV--HNLSVLAKDFKERYGEEVDAPDDDDDDGMTTGSSVFETPKRKGRLSGDAKPRTPVEEAAR--SMSPARLAAEAQRARARAREERFG 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2025.5235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LKJ8_9PHAE3.040e-1429.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQA6_ECTSI2.160e-638.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 741..768

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2025contigH-paniculata_contig2025:19817..22126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2025.5235.1mRNA_H-paniculata_contig2025.5235.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2025 17184..22785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2025.5235.1 ID=prot_H-paniculata_contig2025.5235.1|Name=mRNA_H-paniculata_contig2025.5235.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=770bp
MAAVTPRSGRQESGDKRASGVIDAVEGSAIRDFKGGRTNSAKRSKKTEAT
VLWSPGKRGREGPSVVGDGKGDTGIGGSINGNSSGLKRYGVAGSTRDVGG
RSLASLARAFKERHGEDLRLDEEDDTEETEEEDEPAMSTRRIKRDRSRSG
DHTTVAAAATAATMSPAKLAAEIQRARARAREERFGGGSQLRPAKGLRVA
SLPEKGASGGMAKVQAMAATAAIIASNRSSTEVELFGTTVPKSSESSTAP
DIANASSTSSAVPLAVVPAAVRISPTGGAMTNVPVPSVHSVSQDVPVATA
AAVAAVVPRKQVSALETVGAEKSSEKDTPASSVPATQRTTSGAGSTSIQT
PAVAKKSWPRQHSISFNSHQTPKTAPKVLTLRLRLRDDAPAEPKPQPPEP
TVDGGVEESKGFDPPNIRPDNGVEECKGFEPPNLPPASAVVSTAASHSTA
AYPLSTGGGSVPVPVATGRAPLCPGVSATNTRGSTPSRPRTGFWGPSFGI
EAVGSASVGGPAAAVVRVNPSTPPAPNPWIISPDAPTFAKNQGRPLSRSS
SHSSPSTGISSTRSGESAASYPARAVPENARTAATDQVGHGVGSGETEGA
EVGGKEVSHGDSGTADGAGIPGHLSKKQGSAFLAGSVGGPRCTQPAGVAT
GLSRQEDGLGGQGQEHPAQYVARLLDAQQRNTEQHNTTRQRDSTAAGQIM
GSAGSLAAESSRGNEAVVGTKRGERARVGGILQGVRVGGGAKELLERLKR
EREESLELERKLTQALLDL*
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