prot_H-paniculata_contig20243.5232.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20243.5232.1
Unique Nameprot_H-paniculata_contig20243.5232.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length245
Homology
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BLAST of mRNA_H-paniculata_contig20243.5232.1 vs. uniprot
Match: D8LSM8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM8_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.510e-34
Identity = 115/283 (40.64%), Postives = 137/283 (48.41%), Query Frame = 0 
Query:    1 QIFIKAFPRTADGRQGLLENTGLVEMGDCLTAINGNPLPVATPLHEVMANIRAAKSPLTLRFARYPAAGRIGTPLP---PSSSLEDQEKFAPRHGESKSADRG-----------------------------GAYLGDGNGHLDASSGGGGGEGAKGDIM---------------AEDPELDAVMNSPLLLGLGERVAGIQKNNTLLLQTVERIATAAVTKRAGVEAVASAAVDLTATAGTL--PRTLKAXXXXXXXXXXXXXXXXXXXXXXAARERAVASRR 234
            +IFIKAFPR  +GR+G+LE+TGLVE+ DCLTAING  +  ++ LHEVMA+IRAA+SPL+LRFARYP       PL    PSSSL     F+P    S SA                                G ++G G                                    A DP+LDAV+NS L+LGLGERVA IQK N+ LLQ V+RI  AA  KR GVE VASAA  LTA    L   R L+                       AARERA  +RR
Sbjct:   34 KIFIKAFPRGPNGRRGILESTGLVELDDCLTAINGVSVDKSSALHEVMASIRAAESPLSLRFARYPPP-----PLQRCSPSSSLSSPSLFSP----SPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGRHIGAGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRDAADPDLDAVLNSALVLGLGERVADIQKRNSRLLQEVDRIGRAAADKRQGVERVASAAASLTAAGSDLLPRRALRLLSAARQDAVALCEAMARLDELLAARERAQLARR 307
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20243.5232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSM8_ECTSI1.510e-3440.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20243contigH-paniculata_contig20243:2164..2898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20243.5232.1mRNA_H-paniculata_contig20243.5232.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20243 2164..2898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20243.5232.1 ID=prot_H-paniculata_contig20243.5232.1|Name=mRNA_H-paniculata_contig20243.5232.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp
QIFIKAFPRTADGRQGLLENTGLVEMGDCLTAINGNPLPVATPLHEVMAN
IRAAKSPLTLRFARYPAAGRIGTPLPPSSSLEDQEKFAPRHGESKSADRG
GAYLGDGNGHLDASSGGGGGEGAKGDIMAEDPELDAVMNSPLLLGLGERV
AGIQKNNTLLLQTVERIATAAVTKRAGVEAVASAAVDLTATAGTLPRTLK
ALAAARVNATALCETMARLDESLAARERAVASRRKANDKDRAGK*
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