prot_H-paniculata_contig20235.5228.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20235.5228.1
Unique Nameprot_H-paniculata_contig20235.5228.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
BLAST of mRNA_H-paniculata_contig20235.5228.1 vs. uniprot
Match: A0A6H5KAV0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAV0_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.840e-41
Identity = 73/122 (59.84%), Postives = 90/122 (73.77%), Query Frame = 0
Query:    1 LPTVTGHPVRSLPPDGTRYVTMYPTPATFDPAQLVPGNFIAPHEARLMEVFSLGRTIRFLAILDGIILLFNCAYFPVLYLLL-WAPLAGWMAGTRFSTAWTYAYLCYYVMRLSVDLAYVLTG 121
            LP   G PV+   P GT+YV ++P    FDPA L    F+APHEA+LME  SL +TIR+LA+ DG+IL+ NC YFP+L LLL W PL+GWMAGTR+STAWTYAY CYY++RLS  L+YV  G
Sbjct:   55 LPAARGMPVQPGAP-GTQYVAIFPPSVPFDPADLGVAGFMAPHEAKLMEASSLAKTIRWLAVFDGLILVINCGYFPMLLLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEG 175          
BLAST of mRNA_H-paniculata_contig20235.5228.1 vs. uniprot
Match: A0A6V1TFA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TFA5_HETAK)

HSP 1 Score: 86.3 bits (212), Expect = 2.760e-18
Identity = 37/91 (40.66%), Postives = 61/91 (67.03%), Query Frame = 0
Query:   31 PAQLVPGNFIAPHEARLMEVFSLGRTIRFLAILDGIILLFNCAYFPVLYLLLWAPLAGWMAGTRFSTAWTYAYLCYYVMRLSVDLAYVLTG 121
            P     G  +  HE RL+E +SLGR +R +A++DG+ILLF+C  FPV ++L+W PLAG++  + F  ++   Y  YYV++++ D+ ++L G
Sbjct:   86 PGPQAEGMALGDHERRLLETYSLGRGVRVIALIDGMILLFDCLLFPVFFVLMWGPLAGYLGSSYFRFSFVTCYFLYYVLKMAADIIFILYG 176          
BLAST of mRNA_H-paniculata_contig20235.5228.1 vs. uniprot
Match: A0A7S2Y004_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y004_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.180e-17
Identity = 35/82 (42.68%), Postives = 57/82 (69.51%), Query Frame = 0
Query:   40 IAPHEARLMEVFSLGRTIRFLAILDGIILLFNCAYFPVLYLLLWAPLAGWMAGTRFSTAWTYAYLCYYVMRLSVDLAYVLTG 121
            +   E R++E FSLGR IR +A+LD +ILLF+C  FP+ ++ +W P+ G+ AG  F   ++Y YL YY ++++ D+A++L G
Sbjct:   82 LGAQEQRILETFSLGRGIRCIALLDSVILLFDCLLFPIFFVFVWGPICGYFAGQDFRAFYSYLYLLYYAVKITADIAFILFG 163          
BLAST of mRNA_H-paniculata_contig20235.5228.1 vs. uniprot
Match: D8LQC7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC7_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.070e-6
Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = 0
Query:   31 PAQLVPGNFIAPHEARLMEVFSLGRTIRFLAILDGIILLFNCAYFPVLYLLLWAPLAGWMAGTRFSTAWTYAYLCYYVMRLSVDLAYVLTG 121
            PA   PG    P E+ LM      R +R LAILD II+L   + F  L L++W P+AG++A   F     + +L YY +R+S D+ ++L+G
Sbjct:   77 PAPSFPGT-PRPSES-LMACHRYSRVVRVLAILDAIIVLCGASAFTPLILMIWGPIAGYLAS-NFRLRAAFTFLFYYGLRISWDIGWILSG 164          
BLAST of mRNA_H-paniculata_contig20235.5228.1 vs. uniprot
Match: A0A836CJB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB9_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 9.030e-5
Identity = 31/101 (30.69%), Postives = 54/101 (53.47%), Query Frame = 0
Query:   23 YPTPATFDPAQLVPGNFIAPH--EARLMEVFSLGRTIRFLAILDGIILLFNCAYF--PVLYLLL----WAPLAGWMAGTRFSTAWTYAYLCYYVMRLSVDL 115
            +PTP  F   Q V    +     + RLME +SL R+I+ L+++D I+L FN  +F  P+ ++++    W P  G+ +   +       YL YYV+++  D+
Sbjct:   22 FPTP-DFPSVQAVVAGVVEGQGDDERLMETYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDV 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20235.5228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KAV0_9PHAE2.840e-4159.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1TFA5_HETAK2.760e-1840.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y004_9STRA1.180e-1742.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LQC7_ECTSI2.070e-638.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJB9_9STRA9.030e-530.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..121
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 97..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20235contigH-paniculata_contig20235:3012..4544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20235.5228.1mRNA_H-paniculata_contig20235.5228.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20235 3012..4544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20235.5228.1 ID=prot_H-paniculata_contig20235.5228.1|Name=mRNA_H-paniculata_contig20235.5228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
LPTVTGHPVRSLPPDGTRYVTMYPTPATFDPAQLVPGNFIAPHEARLMEV
FSLGRTIRFLAILDGIILLFNCAYFPVLYLLLWAPLAGWMAGTRFSTAWT
YAYLCYYVMRLSVDLAYVLTG*
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