prot_H-paniculata_contig1081.522.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1081.522.1
Unique Nameprot_H-paniculata_contig1081.522.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length817
Homology
BLAST of mRNA_H-paniculata_contig1081.522.1 vs. uniprot
Match: A0A6H5KRP0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP0_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 4.690e-19
Identity = 87/214 (40.65%), Postives = 114/214 (53.27%), Query Frame = 0
Query:  421 LDWTSKSLPRTPYGVPLLLSCLSTHPDKVAAALHPNIPSSSSPPLPPPPLAGRSVIKPDSAVIGSSSVLSLSLSTGEEKTHDSDKHKEC--WESRESKQVNGESMDVERDEESGCGWGLASGLSSELMPELRRAEKLRQATFEARARCEQAESVARLYVEACKTV----VVTEHGRGAANRLKSAFREDRQQEEQAEWEREVEELQEAILKAAP 628
            LDW S  +PRTPYGVPLLLSCLST+PDK+AAAL+P+ PSS        P AG       +  +G +       S G      S    EC  WE                             LSS+L+P LR+ E +R+AT + RARCEQ ESV R+Y EA K+V    V   H   AA +LK+ FR +RQ+ E+  W +E++E++EA+ KA P
Sbjct: 1035 LDWPSTVIPRTPYGVPLLLSCLSTYPDKLAAALYPS-PSSR-------PNAGGEA----TTTVGVAETEPPG-SEGXXXGCSSGSTSECSEWE-----------------------------LSSKLLPNLRQQELVREATLQDRARCEQTESVCRMYAEASKSVAEPRVSAAH---AAVKLKTVFRAERQEAERLLWRQELKEMEEAVAKAMP 1203          
BLAST of mRNA_H-paniculata_contig1081.522.1 vs. uniprot
Match: D8LJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU4_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.920e-15
Identity = 179/686 (26.09%), Postives = 258/686 (37.61%), Query Frame = 0
Query:    1 MEFEERREELELQQILVEDRTRERRMTFRRERMMGDAIIRYLQVLEQEERKGMAILSRKGQMLQDLVQMLPERREEMDALNQQLEILK-----SNTNTNTSTNKTIIDSCTSKSSSCFHPHNKPEMGGGAAAADFGQVSRATDKSERLDEVT-------------DEMTDGMTPKVDFL-------GKGKEKERTVDGT--GVYLKDTVKNRGAKDHA--------------LFSSLHGETNAAGSGGAG---VVGVH-DTHSMTGETMLRAWYTMEELINVAKVAVKNLDVEKEASAVQFTVTEESLTASALAGREDDGRMT-----TRRRANLRATAAS--LRSGKKGDAIELEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGDGKASFTSGGGRFKIPTAEKPHKTAPKAAGGXXXXXXXXXGKKRKGDSADRLVEKKTKTKGSAKGKAIRKCHAPTGTM--LDWTSKSLPRTPYGVPLLLSCLSTHPDKVAAALHPNIPSSSSPPLPPPPLAGRSVIKPDSAVIGSSSVLSLSLSTGEEKTHDSDKHKECWESRESKQVNGESMDVERDEESGCGWGLASGLSSELMPELRRAEKLRQATFEARARCEQAESVARLYVEACKTV----VVTEHGRGAANRLKSAFREDRQQEEQAEWEREVEELQEAILKAAP 628
            ME++ RR+ LEL++I++ +RTRERR    RE+  G A+++YL  LE+EER    +L  KG ML D+ +MLPER +EM  L  +++ +      S TN N         + T++SS           G G+ A +    S+A+  SE     T             D  + G T             GKGK + R  D    G   K  V +  A+D                        T + G   +G   ++G + D H++T ++MLR W  + E +  A+  V+ ++                          +DGR          R  +R        RS K G+A++++ +                                 SP  G A    G  R      +      P  A  XXXXXXXXX                                A    +  LDW S  +PRTPY VPLLLSCLST+PDK           S                                                 WE                             LSS+L+P LR+ E +R+A  + RARCEQ ESV+R+Y EA K+V    V   H   AA +LK+ FR +RQ+ E+  W +E++E++EA+ KA P
Sbjct:  287 MEWDARRDALELKEIMIAERTRERRRGLMREQAKGQAVVQYLTKLEREERGRSNLLRAKGLMLADVARMLPERVKEMIELRNKIDKISQGLGGSGTNDNNGXXXXXXKAGTAESSV-----EGTAAGTGSLAGEAKNKSKASRASEGSTNATANTQRTSPSSSGFDMASAGATTPGSSACSDGKDKGKGKARRRNDDNGKGGESAKSGVVDSMAEDEGEQEASXXXXXXXXXXXXXXFAATPSCGDDASGEGLLLGSNPDVHALTAQSMLRCWNAVRERLAAARNVVREVNAGXXXXXXXXXXXXXXXXXXXXXXXAEDGRPRGVGGGKGPRGGIRPAGGGGRARSRKGGEAVDMDVDSDVSSCDESNNDN--------------------SPPRGAAH---GQQRNATRKRKASRVLGPSNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVVPVERLDWPSTVIPRTPYAVPLLLSCLSTYPDKGGXXXXXXXXXSE------------------------------------------------WE-----------------------------LSSKLLPSLRQQELVREANLQDRARCEQTESVSRMYAEASKSVAEPRVSAAH---AAVKLKTVFRAERQEAERLLWRQELKEMEEAVAKAMP 864          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1081.522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRP0_9PHAE4.690e-1940.65Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJU4_ECTSI1.920e-1526.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 602..622
NoneNo IPR availableCOILSCoilCoilcoord: 63..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1081contigH-paniculata_contig1081:392..11651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1081.522.1mRNA_H-paniculata_contig1081.522.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1081 2..11731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1081.522.1 ID=prot_H-paniculata_contig1081.522.1|Name=mRNA_H-paniculata_contig1081.522.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=817bp
MEFEERREELELQQILVEDRTRERRMTFRRERMMGDAIIRYLQVLEQEER
KGMAILSRKGQMLQDLVQMLPERREEMDALNQQLEILKSNTNTNTSTNKT
IIDSCTSKSSSCFHPHNKPEMGGGAAAADFGQVSRATDKSERLDEVTDEM
TDGMTPKVDFLGKGKEKERTVDGTGVYLKDTVKNRGAKDHALFSSLHGET
NAAGSGGAGVVGVHDTHSMTGETMLRAWYTMEELINVAKVAVKNLDVEKE
ASAVQFTVTEESLTASALAGREDDGRMTTRRRANLRATAASLRSGKKGDA
IELEAENGNENANDNNPSDRDEGQQRNEKNQSQGSDSEDSPGDGKASFTS
GGGRFKIPTAEKPHKTAPKAAGGGGSGTGSASGKKRKGDSADRLVEKKTK
TKGSAKGKAIRKCHAPTGTMLDWTSKSLPRTPYGVPLLLSCLSTHPDKVA
AALHPNIPSSSSPPLPPPPLAGRSVIKPDSAVIGSSSVLSLSLSTGEEKT
HDSDKHKECWESRESKQVNGESMDVERDEESGCGWGLASGLSSELMPELR
RAEKLRQATFEARARCEQAESVARLYVEACKTVVVTEHGRGAANRLKSAF
REDRQQEEQAEWEREVEELQEAILKAAPIPPDSTPILVEVQAADKDKKTM
SMPSSMTTESVVVPPESPSAIPIAIAVPAEVGRGKGNTASKGKDTKLGRR
GATLATRGYQKEAAAGNNDSSSLRVSGAAGATSSTPSTSPRCLPRAAKPS
SIFTGTSSTFAGGSSSQGGKGGRGELPSPAEPIVARKGRSAKGGSRPPSP
KFSRRPTTRGGDAKSK*
back to top