prot_H-paniculata_contig20124.5184.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20124.5184.1
Unique Nameprot_H-paniculata_contig20124.5184.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: D7G0I3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I3_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 6.390e-21
Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 0
Query:   24 AVEYPDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPVRA 77
            A EYPDYH+IV+ PMDLGTIQE I++  YPSLEACAKDVR +WTNAYLYNP ++
Sbjct:    2 ASEYPDYHQIVSTPMDLGTIQENIRQNVYPSLEACAKDVRTVWTNAYLYNPAKS 55          
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A0H2RU84_9AGAM (Bromo domain-containing protein n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2RU84_9AGAM)

HSP 1 Score: 68.9 bits (167), Expect = 7.090e-12
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 0
Query:   15 AAIFNHPVSAVEYPDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYN 73
            A  F  PVS ++YPDY+EI++NPMDL T+Q+K++ + Y S +  A D+  IW+N Y YN
Sbjct:   64 AEAFLKPVSKIDYPDYYEIISNPMDLQTVQKKVKTKQYKSKKEFADDLDLIWSNCYTYN 122          
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A0M0JNZ0_9EUKA (Bromodomain containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JNZ0_9EUKA)

HSP 1 Score: 68.2 bits (165), Expect = 1.050e-11
Identity = 26/59 (44.07%), Postives = 42/59 (71.19%), Query Frame = 0
Query:   15 AAIFNHPVSAVEYPDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYN 73
            A +FN PV   +YP Y+E++++PMDLGTI++K++  +Y  L+A   D+R +W N Y +N
Sbjct:   50 AWLFNKPVDVTKYPQYYEVISHPMDLGTIRKKLEGGEYEDLDAFTSDLRLVWHNCYTFN 108          
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: D2VKM3_NAEGR (Bromodomain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VKM3_NAEGR)

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-11
Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   18 FNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPV 75
            FN+PV  V+   PDY +++ NPMDLGT+++K+   +Y  +     DVR IW+N YLYNPV
Sbjct:  203 FNNPVDPVQLQIPDYFDVIKNPMDLGTVEKKVNNNEYMDVYQFLDDVRVIWSNCYLYNPV 262          
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A7S2GTN7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GTN7_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 2.100e-11
Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    6 PLLFFLS--PRAAIFNHPVSA--VEYPDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNP 74
            PLL  L   P A  F  PV A  ++ PDYH+++T PMDLGTI+ K+++  Y S  A   DVR +W NA  YNP
Sbjct:   52 PLLQLLKQEPNALYFLQPVDAEALKLPDYHQVITRPMDLGTIESKMEQRAYQSPGAFVDDVRLVWENARRYNP 124          
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A8C9XGG1_SANLU (Bromo domain-containing protein n=1 Tax=Sander lucioperca TaxID=283035 RepID=A0A8C9XGG1_SANLU)

HSP 1 Score: 64.7 bits (156), Expect = 2.330e-11
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   18 FNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPVRA 77
            F+ PV AV    PDYH I+T+PMDLGTI+++++   Y S   C +D   ++TN Y+YN VR+
Sbjct:   73 FHQPVDAVSLGLPDYHTIITSPMDLGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKVRS 134          
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A3P9QF64_POERE (Bromo domain-containing protein n=4 Tax=Poeciliinae TaxID=586240 RepID=A0A3P9QF64_POERE)

HSP 1 Score: 63.9 bits (154), Expect = 3.380e-11
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   18 FNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPVRA 77
            F  PV AV    PDYH+I+T+PMDLGTI+++++   Y S   C +D   ++TN Y+YN VR+
Sbjct:   70 FYQPVDAVSLGLPDYHKIITSPMDLGTIKKRLENNYYWSSSECLQDFNTMFTNCYIYNKVRS 131          
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A3Q1F985_9TELE (Bromo domain-containing protein n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1F985_9TELE)

HSP 1 Score: 63.5 bits (153), Expect = 4.000e-11
Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   18 FNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPVRA 77
            F  PV AV    PDYH+I+T+PMD+GTI+++++   Y S   C +D   ++TN Y+YN VR+
Sbjct:   61 FYQPVDAVSLGLPDYHKIITSPMDMGTIKKRLENSYYWSASECMQDFNTMFTNCYIYNKVRS 122          
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: UPI000C1D490B (transcription factor GTE9-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D490B)

HSP 1 Score: 66.6 bits (161), Expect = 4.500e-11
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 0
Query:   13 PRAAIFNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNP 74
            P    FN PV  V+   PDY  IVT PMDLGTI++K++R+ Y + E  A DVR  ++NA LYNP
Sbjct:  124 PHGFAFNQPVDPVKLKIPDYFSIVTKPMDLGTIKQKLERDTYFNAEEFASDVRLTFSNAMLYNP 187          
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A834LWX1_RHOSS (Uncharacterized protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834LWX1_RHOSS)

HSP 1 Score: 66.6 bits (161), Expect = 4.570e-11
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0
Query:   11 LSPRAAIFNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNP 74
            + P   +FNHPV  V+   PDYH I+++PMDLGTI+ K+++  Y ++E  A DV   ++NA +YNP
Sbjct:  132 MHPAGWVFNHPVDPVKLNIPDYHSIISDPMDLGTIKTKLEKNTYSNVEDFAADVWLTFSNAMVYNP 197          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0I3_ECTSI6.390e-2174.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0H2RU84_9AGAM7.090e-1249.15Bromo domain-containing protein n=1 Tax=Schizopora... [more]
A0A0M0JNZ0_9EUKA1.050e-1144.07Bromodomain containing protein n=1 Tax=Chrysochrom... [more]
D2VKM3_NAEGR1.800e-1148.33Bromodomain-containing protein n=1 Tax=Naegleria g... [more]
A0A7S2GTN7_9EUKA2.100e-1147.95Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A8C9XGG1_SANLU2.330e-1146.77Bromo domain-containing protein n=1 Tax=Sander luc... [more]
A0A3P9QF64_POERE3.380e-1146.77Bromo domain-containing protein n=4 Tax=Poeciliina... [more]
A0A3Q1F985_9TELE4.000e-1145.16Bromo domain-containing protein n=1 Tax=Acanthochr... [more]
UPI000C1D490B4.500e-1151.56transcription factor GTE9-like n=1 Tax=Olea europa... [more]
A0A834LWX1_RHOSS4.570e-1145.45Uncharacterized protein n=2 Tax=Rhododendron TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 61..77
score: 31.52
coord: 43..61
score: 25.4
coord: 27..43
score: 54.35
coord: 13..26
score: 31.06
IPR001487BromodomainSMARTSM00297bromo_6coord: 1..77
e-value: 4.6E-7
score: 39.5
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 13..76
e-value: 3.7E-20
score: 71.8
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 10..77
score: 16.473
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 7..77
e-value: 2.6E-26
score: 94.0
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 13..74
NoneNo IPR availablePANTHERPTHR45926:SF5TRANSCRIPTION FACTOR GTE4coord: 13..74
NoneNo IPR availablePANTHERPTHR45926FAMILY NOT NAMEDcoord: 13..74
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..77
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.516
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 15..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20124contigH-paniculata_contig20124:753..4657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20124.5184.1mRNA_H-paniculata_contig20124.5184.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20124 753..4657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20124.5184.1 ID=prot_H-paniculata_contig20124.5184.1|Name=mRNA_H-paniculata_contig20124.5184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
LRFFSPLLFFLSPRAAIFNHPVSAVEYPDYHEIVTNPMDLGTIQEKIQRE
DYPSLEACAKDVRRIWTNAYLYNPVRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf
IPR018359Bromodomain_CS