mRNA_H-paniculata_contig2.5118.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: D7FKH4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH4_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 1.670e-20 Identity = 40/57 (70.18%), Postives = 50/57 (87.72%), Query Frame = 1
Query: 1 DGFPRNLVQAAWLESAGVAVDRVLNITLPEWVAVRKITARRFCPACGGSFNVADIHE 171
DGFPRNL QAAWLESAG+ +DRV+NITLPEW+ V+KI+ARR CP C SFN+AD+++
Sbjct: 85 DGFPRNLAQAAWLESAGIKIDRVINITLPEWITVKKISARRSCPECRRSFNIADVNK 141
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: A0A2D4BSY0_PYTIN (ADK_lid domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSY0_PYTIN) HSP 1 Score: 58.9 bits (141), Expect = 1.770e-6 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 1
Query: 1 DGFPRNLVQAAWLESAGVAVDRVLNITLPEWVAVRKITARRFCPACGGSFNVADIHE 171
DGFPR L QA V D V+NI LP+W+ V KI+ RR C +CG +NVA I+
Sbjct: 113 DGFPRTLTQAEEFAKV-VEFDLVVNIDLPQWILVEKISGRRVCKSCGTGYNVAYINH 168
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: A0A2G6I132_9SPIR (Adenylate kinase (Fragment) n=1 Tax=Spirochaetales bacterium TaxID=2026792 RepID=A0A2G6I132_9SPIR) HSP 1 Score: 57.4 bits (137), Expect = 3.010e-6 Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 1 DGFPRNLVQAAWLESAGVAVDRVLNITLPEWVAVRKITARRFCPACGGSFNVADIHEVQ 177
DGFPR ++QA LE ++ VLN+ P+ +R++T RRFCPACG S++V I Q
Sbjct: 84 DGFPRTILQAEALEKM-TSIKHVLNLICPDRELIRRLTGRRFCPACGRSYHVEFIPPKQ 141
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: A0A4Z0Y3D5_9FIRM (Adenylate kinase n=1 Tax=Caproiciproducens galactitolivorans TaxID=642589 RepID=A0A4Z0Y3D5_9FIRM) HSP 1 Score: 57.4 bits (137), Expect = 3.630e-6 Identity = 22/52 (42.31%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 1 DGFPRNLVQAAWLESAGVAVDRVLNITLPEWVAVRKITARRFCPACGGSFNV 156
DGFPR + QA L+ G+A+D+V++I +P+ V V +++ RR C +CG S+++
Sbjct: 84 DGFPRTIPQAEALDKMGIAIDKVIDIEVPDEVIVERMSGRRVCESCGASYHL 135
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: A0A3A9G804_9BACT (Adenylate kinase n=1 Tax=bacterium 1XD42-8 TaxID=2320102 RepID=A0A3A9G804_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 1.230e-5 Identity = 26/66 (39.39%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 1 DGFPRNLVQAAWLESAGVAVDRVLNITLPEWVAVRKITARRFCPACGGSFNVADIHEVQTG--SKC 192
DGFPR + QA L++ GVA+DRV+ I++P+ +++ RR C +CG S+++ Q G KC
Sbjct: 84 DGFPRTVPQAEALDAMGVAIDRVVEISVPDEAIEKRLGGRRVCGSCGSSYHMEHKPPKQEGVCDKC 149
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: UPI000563C009 (adenylate kinase n=1 Tax=Sulfurihydrogenibium subterraneum TaxID=171121 RepID=UPI000563C009) HSP 1 Score: 55.5 bits (132), Expect = 1.660e-5 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 3
Query: 219 CEKGRACPRTLARRSDDTEEIVRKRLKVYHSRTVPLITFYEDRGCSRQGTIPK**PDKVY 398
C+K C L +R DD EE++RKRL+VYHS+T PLI +Y+D T P P++VY
Sbjct: 150 CDK---CDTPLIQRDDDKEEVIRKRLEVYHSQTAPLIEYYKDVLLKIDATRP---PEEVY 203
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: A0A1E2S1K4_9HYPH (Adenylate kinase n=1 Tax=Methyloligella halotolerans TaxID=1177755 RepID=A0A1E2S1K4_9HYPH) HSP 1 Score: 55.5 bits (132), Expect = 1.880e-5 Identity = 30/83 (36.14%), Postives = 45/83 (54.22%), Query Frame = 3
Query: 105 EDHRQAILPCVRRQF*CSGHPRGA-DGFEMPAILPDFDSCEKGRACPRTLARRSDDTEEIVRKRLKVYHSRTVPLITFYEDRG 350
E + A++ + +F C+ G D ++ P + + D C RR DDTEE+VR RLK YH +T PLI FY+++G
Sbjct: 113 EVNDDALVERITGRFSCAQCGAGYHDVYKRPKVAGECDRCGATE-----FVRRKDDTEEVVRSRLKAYHEQTKPLIDFYKNKG 190
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: A0A832QAW3_9GAMM (Adenylate kinase n=1 Tax=Pseudomonadaceae bacterium TaxID=1914538 RepID=A0A832QAW3_9GAMM) HSP 1 Score: 54.7 bits (130), Expect = 3.260e-5 Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 1 DGFPRNLVQAAWLESAGVAVDRVLNITLPEWVAVRKITARRFCPACGGSFNVADIHEVQTG 183
DGFPR + QA L AGVA+D VL I +P+ +R+++ RR PA G ++++ + VQ G
Sbjct: 84 DGFPRTIPQAQALVDAGVAIDVVLEIDVPDEEIIRRLSGRRVHPASGRTYHIDNKPPVQAG 144
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: C1DX53_SULAA (Adenylate kinase n=2 Tax=Sulfurihydrogenibium azorense TaxID=309806 RepID=C1DX53_SULAA) HSP 1 Score: 54.7 bits (130), Expect = 3.270e-5 Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 3
Query: 219 CEKGRACPRTLARRSDDTEEIVRKRLKVYHSRTVPLITFYEDRGCSRQGTIPK**PDKVY 398
C+K C L +R DD EE++RKRL VYHS+T PLI +Y+D T P P++VY
Sbjct: 156 CDK---CGTPLIQRDDDKEEVIRKRLSVYHSQTAPLIDYYKDILLKIDATKP---PEEVY 209
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Match: A0A7X8GNM1_9BACT (Adenylate kinase n=1 Tax=Synergistaceae bacterium TaxID=2053624 RepID=A0A7X8GNM1_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 4.480e-5 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 3
Query: 213 DSCEKGRACPRTLARRSDDTEEIVRKRLKVYHSRTVPLITFYEDRG 350
DSC+ C L +R DD EE++RKRL+VYHS+T PL+ FY ++G
Sbjct: 148 DSCQ---ICGGDLVQREDDREEVIRKRLEVYHSQTAPLVGFYREKG 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2.5118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2.5118.1 >prot_H-paniculata_contig2.5118.1 ID=prot_H-paniculata_contig2.5118.1|Name=mRNA_H-paniculata_contig2.5118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp DGFPRNLVQAAWLESAGVAVDRVLNITLPEWVAVRKITARRFCPACGGSFback to top mRNA from alignment at H-paniculata_contig2:113378..119290+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2.5118.1 ID=mRNA_H-paniculata_contig2.5118.1|Name=mRNA_H-paniculata_contig2.5118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5913bp|location=Sequence derived from alignment at H-paniculata_contig2:113378..119290+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2:113378..119290+ >mRNA_H-paniculata_contig2.5118.1 ID=mRNA_H-paniculata_contig2.5118.1|Name=mRNA_H-paniculata_contig2.5118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=594bp|location=Sequence derived from alignment at H-paniculata_contig2:113378..119290+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |