prot_H-paniculata_contig19992.5106.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19992.5106.1
Unique Nameprot_H-paniculata_contig19992.5106.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length48
Homology
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BLAST of mRNA_H-paniculata_contig19992.5106.1 vs. uniprot
Match: A0A6H5K857_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K857_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 3.850e-12
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    2 LAIAAVDEAGNVDPDPAIWRWSVDGRPRTSMDSAPQVYVYV 42
            +AIAAVDEAGNVDP+PA+W WSVD RPRTS+ SAPQ    V
Sbjct:   37 VAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTAV 77
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BLAST of mRNA_H-paniculata_contig19992.5106.1 vs. uniprot
Match: D8LBK9_ECTSI (OmpA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK9_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.850e-12
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    2 LAIAAVDEAGNVDPDPAIWRWSVDGRPRTSMDSAPQVYVYV 42
            +AIAAVDEAGNVDP+PA+W WSVD RPRTS+ SAPQ    V
Sbjct:  368 VAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTAV 408
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19992.5106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K857_9PHAE3.850e-1273.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBK9_ECTSI3.850e-1273.17OmpA domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19992contigH-paniculata_contig19992:3434..3577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19992.5106.1mRNA_H-paniculata_contig19992.5106.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19992 3434..3604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19992.5106.1 ID=prot_H-paniculata_contig19992.5106.1|Name=mRNA_H-paniculata_contig19992.5106.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=48bp
MLAIAAVDEAGNVDPDPAIWRWSVDGRPRTSMDSAPQVYVYVCVCEC*
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