prot_H-paniculata_contig198.5048.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig198.5048.1
Unique Nameprot_H-paniculata_contig198.5048.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length431
Homology
BLAST of mRNA_H-paniculata_contig198.5048.1 vs. uniprot
Match: D8LI07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI07_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.650e-52
Identity = 169/436 (38.76%), Postives = 229/436 (52.52%), Query Frame = 0
Query:    1 SNLHAQLRRLWGGSPPARARGLVAVQEVFGCRQELDRILCALAAREVTLACVRTCAGSKGATSISAANASDSRPFTLSIMEDRFSPVVVDSCELRERAAARVRVMTVAGLRVGLTRRVFAREPLLPSEVEAEEEEQSRRPKGSRPPPVDRESILALVVPSK-SVVSARETAPEE-PVRYPTMAQVATMMWCEEDKENKEEGATQRRR----ETSPATSFVDRLRFSIQNLDGQNFEDQDGEYISSSPSCSSLSPSSSSAXXXFSRDSAXXXXXXXXXVEDSFEDARRFFDDAYGGGRETG----LEGRRTYSSLRTPSIREQVEQCEGYWNRRRELDSVLRRMRAAIRCMDCTLGAAEVRRMAKRVLKVAVLAASETGRAANAAAARSMVRGLGDDNRIRLDDGRHREPRSSQQEQKATALRKGGRWVIVYVGIRR 426
            ++L ++L RLWG SPP RA GL  ++ + G R++LD IL    +R V     R      G    +++  S+ RPFT++ +  RF+P V +  ELRER   RVRV+T AGLRVGL RRVFAREPLLPS+VEAEEE QSR+   + P PVD E + ALVVP + S  SA E +PE  P  YP+MA+V+++MWCE D++               E+SP    +  LR S+Q LDG   +D+D                    X   + + +           +S          + GG    G     EG R  S +R    RE+ E  E  + R+ E+ SVLRR+R AIR MD T    +VR MAKRV+++AV+ AS++       AAR  +RGLGD  R+R            QQ Q+  A      WV VYVG+ R
Sbjct:  182 NDLPSKLHRLWGTSPPDRAEGLAVLRNMLGYRKDLDGIL----SRHVPTKGPRYTRPFHGNDYRASSPFSNPRPFTVATLAGRFAPTVTNPSELRERVGTRVRVVTAAGLRVGLARRVFAREPLLPSDVEAEEERQSRQQPDASPAPVDVEDLRALVVPVRASASSAPEMSPEGGPAPYPSMAEVSSVMWCEYDEDXXXXXXXXXXXXXXXESSPGKKRL--LRVSVQTLDGDVCDDEDEXXXXXXXXXXXXXXXXXXXXFGETEEGSFFDTASPQQGRESTGARGTAAGRSRGGDLSEGGRGNAEGARRTSGMRNSKAREE-ELDEVEYQRKEEVASVLRRLRVAIRRMDGTWTEEKVRSMAKRVVRMAVMTASKS-ELVTTTAARGALRGLGDRTRLRR-----------QQAQRGGAGSGDVGWVTVYVGVGR 598          
BLAST of mRNA_H-paniculata_contig198.5048.1 vs. uniprot
Match: A0A6H5L387_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L387_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 2.200e-38
Identity = 136/350 (38.86%), Postives = 187/350 (53.43%), Query Frame = 0
Query:    1 SNLHAQLRRLWGGSPPARARGLVAVQEVFGCRQELDRILCALAAREVTLACVRTCAGSKGATSISAANASDSRPFTLSIMEDRFSPVVVDSCELRERAAARVRVMTVAGLRVGLTRRVFAREPLLPSEVEAEEEEQSRRPKGSRPPPVDRESILALVVPSKSVVS-ARETAPEE-PVRYPTMAQVATMMWCEEDKENKEEGATQRRRETSPATSFVDR--LRFSIQNLDGQNFEDQDGEYISSSPSCSSLSPSSSSAXXXFSRDSAXXXXXXXXXVEDSFEDARRFFDDAYGGG--RETG---LEGRRTYSSLRTPSIREQVEQCEGYWNRRRELDSVLRRMRAAIRCMD 341
            ++L ++L RLWG SPP RA GL  ++ + G R+ELD IL    +R +            G    +++++S+ RPFTL+ +  RF+P V +  ELRER   RVRV+T AGLRVGL RRVFAREPLLPS+VEAEEE   R+P  S P PVD E + ALVVP ++  S A E +PE  P  YP+M +V+++MWC+ D++            TS  +   ++  LR S+Q LDG   +D+D                        + + +           +S   ARR      GGG  RE G    +G R  S +R    R++     GY  R+ EL SVLRR+R AIR MD
Sbjct:  182 TDLPSKLHRLWGTSPPDRAEGLAVLRNMLGYRKELDGIL----SRHMPTKGYSYTRPVHGNDYRASSSSSNPRPFTLATLAGRFAPTVTNPSELRERMGTRVRVVTAAGLRVGLARRVFAREPLLPSDVEAEEE---RQPDDS-PAPVDVEDLRALVVPVRASASPAPEMSPEGGPAPYPSMFEVSSVMWCDYDEDEXXXXXXXXXXXTSTESRPGEKRLLRVSVQTLDGDVCDDEDEXXXXXXXXXXXXXXXXXXTGFSETEEGSFFETASSQQRRES-TGARRTAAGRTGGGDLREGGRGTAKGARWTSGIRNSKARKEELDEIGY-QRKEELASVLRRLRVAIRRMD 521          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig198.5048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI07_ECTSI1.650e-5238.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L387_9PHAE2.200e-3838.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig198contigH-paniculata_contig198:17105..22372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig198.5048.1mRNA_H-paniculata_contig198.5048.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig198 17105..22372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig198.5048.1 ID=prot_H-paniculata_contig198.5048.1|Name=mRNA_H-paniculata_contig198.5048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=431bp
SNLHAQLRRLWGGSPPARARGLVAVQEVFGCRQELDRILCALAAREVTLA
CVRTCAGSKGATSISAANASDSRPFTLSIMEDRFSPVVVDSCELRERAAA
RVRVMTVAGLRVGLTRRVFAREPLLPSEVEAEEEEQSRRPKGSRPPPVDR
ESILALVVPSKSVVSARETAPEEPVRYPTMAQVATMMWCEEDKENKEEGA
TQRRRETSPATSFVDRLRFSIQNLDGQNFEDQDGEYISSSPSCSSLSPSS
SSAESSFSRDSAQEQEQEQDTVEDSFEDARRFFDDAYGGGRETGLEGRRT
YSSLRTPSIREQVEQCEGYWNRRRELDSVLRRMRAAIRCMDCTLGAAEVR
RMAKRVLKVAVLAASETGRAANAAAARSMVRGLGDDNRIRLDDGRHREPR
SSQQEQKATALRKGGRWVIVYVGIRRQVSH*
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