prot_H-paniculata_contig9996.17571.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9996.17571.1
Unique Nameprot_H-paniculata_contig9996.17571.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
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BLAST of mRNA_H-paniculata_contig9996.17571.1 vs. uniprot
Match: D7G139_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G139_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 3.640e-8
Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0 
Query:    1 MDRDGVTFGDFG--TGGXXXXXXXXXXXXXXXGGKPVVDQDLMDTWYPDCRECTCCK 55
            MD DGVTFGDFG     XXXXXXXXXXXX   G +    QDLMDTWYPDCREC+CCK
Sbjct:  323 MDSDGVTFGDFGGXXXXXXXXXXXXXXXXRGAGARSTAQQDLMDTWYPDCRECSCCK 379
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BLAST of mRNA_H-paniculata_contig9996.17571.1 vs. uniprot
Match: A0A7S4MJ14_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MJ14_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 1.660e-5
Identity = 20/43 (46.51%), Postives = 27/43 (62.79%), Query Frame = 0 
Query:   35 VVDQDLM--DTWYPDCRECTCCKGYKHGCKTPSCAEAGICFCS 75
            +V++ L   + W+PD   CTCCKG+KHGCK   C    +C CS
Sbjct:  132 LVEKHLARREEWFPDATNCTCCKGFKHGCKNSICKSLAVCRCS 174
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9996.17571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G139_ECTSI3.640e-871.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4MJ14_9EUKA1.660e-546.51Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9996contigH-paniculata_contig9996:4428..8333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9996.17571.1mRNA_H-paniculata_contig9996.17571.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9996 4428..8343 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9996.17571.1 ID=prot_H-paniculata_contig9996.17571.1|Name=mRNA_H-paniculata_contig9996.17571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MDRDGVTFGDFGTGGVDGRRGNGGSGGGRGGGKPVVDQDLMDTWYPDCRE
CTCCKGYKHGCKTPSCAEAGICFCSAAGATMAPVAQAPSAPTPEDMSKPP
ATQGDGAETSSGAGGAG
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