prot_H-paniculata_contig9987.17562.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9987.17562.1
Unique Nameprot_H-paniculata_contig9987.17562.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length290
Homology
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A446P7W8_TRITD (Uncharacterized protein n=3 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446P7W8_TRITD)

HSP 1 Score: 152 bits (385), Expect = 5.630e-38
Identity = 99/298 (33.22%), Postives = 167/298 (56.04%), Query Frame = 0
Query:    9 PMDKLVVGTKMLYKRKVNKDGKMEKYQCRLAAQGFPQIKEIHYTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHF--PGAMGKLNKAIYGLVQAGR-WADPGMFRNVVD------------------GGVEVAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVE--KTSRIPAMSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETPG 283
            P ++  +G+K ++KRK+N  G+++KY+ RL A+GF Q++ + + E +SP     SIR++ A  A  D EL   DV+ +FL   ++EE+ +  PE F      G + KLNK+IYGL QA R W    +F N +                   G   V + ++VDDI++ + D+ T+  + T L  +F +KD+GEA + +   + R+R+ R L + Q     ++ +RF +E  K  ++P + G   LS+   AKTPEE+++M+  PY  A+G+ ++ ++ TR DI   V  ++R+   PG
Sbjct:  881 PNNRKSIGSKWIFKRKLNATGQVDKYKARLVAKGFTQMEGVDFVETFSPVAKFTSIRIISALTAYYDLELHQMDVKTSFLNGMLEEEIYMNKPEGFVERGNEGKVCKLNKSIYGLKQASRQWYI--LFDNAITSYGFSMTEGDHCIYFKIMGNKFVLLSLYVDDILIASNDKSTLMEVKTWLSSKFDMKDMGEASYVLGVEIRRDRRKRMLGLSQKACLNNVLQRFSMENCKPVKVPILRGT-KLSEEMCAKTPEERKQMSNIPYSSALGSLMYAMLFTRPDICHVVGLLSRYQVNPG 1175          
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 148 bits (373), Expect = 2.100e-36
Identity = 105/313 (33.55%), Postives = 167/313 (53.35%), Query Frame = 0
Query:    1 MVDNG----IARPMDKLVVGTKMLYKRKVNKDGKMEKYQCRLAAQGFPQIKEIHYTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHF-PGAMGKLNKAIYGLVQAGR-W-----------------ADPGMFRNVVDGGVEVAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVE--KTSRIPAMSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETPGQHTTR 288
            +++NG    + +P     V  K +YK K +  G +E+++ RL A+GF Q + + + E Y+P     ++R LL   AA+D EL   DV+ AFL  +++EE+ ++ P+ ++   P  + +L K IYGL QA R W                 +D  +F  V+DG   V VVV VDDI++ AK    +  +  HL  +F ++DLG AE+++   +TR+R+AR +K+ Q    + +  R+G+E  K    P  SG     +GD   T        K+PY E VG+ L+  + TR DIA AV A+AR++  P +   R
Sbjct:  587 LLENGTWELVPKPEGVKPVPMKWVYKIKRDAAGNIERFKSRLVAKGFLQRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPETVCRLKKTIYGLRQAPRAWHQKLKTELGEIEFRASESDAALFTGVIDGE-RVWVVVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQKKLTKELLGRYGLEAAKARSTPLSSGEKLQREGDPLDT-------GKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMAGPTEEHWR 891          
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 148 bits (373), Expect = 2.290e-36
Identity = 97/299 (32.44%), Postives = 162/299 (54.18%), Query Frame = 0
Query:    6 IARPMDKLVVGTKMLYKRKVNKDGKMEKYQCRLAAQGFPQIKEIHYTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHFPGAMGKLNKAIYGLVQAGR-W-----------------ADPGMF-RNVVDGGVEVAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVEKTSRIPA-MSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETPGQ 284
            + RP ++ V+  K ++K K   DG++EKY+ RL A+GF Q++ + + E ++P    AS+R LLA AA  D E+   DV+ AFL  D+DEE+ +++P  F      + KLNKA+YGL QAGR W                 +D  +F +N  D G+ + + ++VDD+++ + +   +  L   L  RF++ DLGEA + +   +TR+R  R L++ QH Y +    + G+     +   M+    L K  EA       E+   PY   +G+ ++ ++ TR D+A  V A+++   TPG+
Sbjct:  961 VERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKN--DDGILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGMADCRPVSTPMAQNQKLVKLSEA-------EIDPKPYQSVLGSLMYAMIGTRPDLAFTVGALSQHAATPGK 1250          
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 147 bits (372), Expect = 2.890e-36
Identity = 97/299 (32.44%), Postives = 162/299 (54.18%), Query Frame = 0
Query:    6 IARPMDKLVVGTKMLYKRKVNKDGKMEKYQCRLAAQGFPQIKEIHYTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHFPGAMGKLNKAIYGLVQAGR-W-----------------ADPGMF-RNVVDGGVEVAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVEKTSRIPA-MSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETPGQ 284
            + RP ++ V+  K ++K K   DG++EKY+ RL A+GF Q++ + + E ++P    AS+R LLA AA  D E+   DV+ AFL  D+DEE+ +++P  F      + KLNKA+YGL QAGR W                 +D  +F +N  D G+ + + ++VDD+++ + +   +  L   L  RF++ DLGEA + +   + R+R  R L++ QH Y +    + G+     +   M+    L K  EA       E+   PY  A+G+ ++ ++ TR D+A  V A+++   TPG+
Sbjct:  638 VERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKN--DDGILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGMANCRPVSTPMAQNQKLVKLSEA-------EIDPKPYQSALGSLMYAMIGTRPDLAFTVGALSQHAATPGK 927          
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A1Y1IQX0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQX0_KLENI)

HSP 1 Score: 145 bits (365), Expect = 2.570e-35
Identity = 105/313 (33.55%), Postives = 165/313 (52.72%), Query Frame = 0
Query:    1 MVDNG----IARPMDKLVVGTKMLYKRKVNKDGKMEKYQCRLAAQGFPQIKEIHYTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHF-PGAMGKLNKAIYGLVQAGR-W-----------------ADPGMFRNVVDGGVEVAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVE--KTSRIPAMSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETPGQHTTR 288
            +++NG    + +P     V  K +YK K +  G +E+++ RL A+GF Q + + + E Y+P     ++R LL   AA+D EL   DV+ AFL  +++EE+ ++ P+ ++   P  + +L K IYGL QA R W                 +D  +F  VVDG   V VVV VDDI++ A     +  +  HL  +F ++DLG AE+++   +TR+R+AR +K+ Q    + +  R+ +E  K    P  SG     +GD   T        K+PY E VG+ L+  + TR DIA AV A+AR++  P Q   R
Sbjct:  862 LLENGTWELVPKPEGVKPVPMKWVYKIKQDAAGNIERFKSRLVAKGFLQRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPKTVCRLKKTIYGLRQAPRAWHQRLKAELGEIEFQASESDAALFTGVVDGE-RVWVVVWVDDILIAAAGEKRLAKVKAHLSRKFDVRDLGPAEYFLGMELTRDRRARTVKLTQKKLTKELLGRYELEAAKARSTPLSSGEKLQKEGDPLDT-------GKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMSGPTQEHWR 1166          
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 143 bits (360), Expect = 8.420e-35
Identity = 95/294 (32.31%), Postives = 156/294 (53.06%), Query Frame = 0
Query:    9 PMDKLVVGTKMLYKRKVNKDGKMEKYQCRLAAQGFPQIKEIHYTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHFPGAMGKLNKAIYGLVQAGR-WADP--------GMFRNVVDGGVE--------VAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVEKTSRIPA-MSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETPGQ 284
            P  K  + TK ++K K N +G + +Y+ RL  +G  Q + + Y+E +SP     S+R L A AA  D  +   D   AFL  ++ EEV ++ PE +    G + +L K++YGL QA + W D         G+ R+ VD  +         V V ++VDD++V + D+   + +   L  + K+KD+G A   +   V R+   + +K+DQ  Y  S+ +RFG++  + +   +  +  L+     K+ EEK+EM K PY EAVG+ L+    TR DI+ AV  ++RF + PG+
Sbjct:  271 PEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEYSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGK 564          
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A034VP70_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034VP70_BACDO)

HSP 1 Score: 143 bits (360), Expect = 1.140e-34
Identity = 95/294 (32.31%), Postives = 156/294 (53.06%), Query Frame = 0
Query:    9 PMDKLVVGTKMLYKRKVNKDGKMEKYQCRLAAQGFPQIKEIHYTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHFPGAMGKLNKAIYGLVQAGR-WADP--------GMFRNVVDGGVE--------VAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVEKTSRIPA-MSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETPGQ 284
            P  K  + TK ++K K N +G + +Y+ RL  +G  Q + + Y+E +SP     S+R L A AA  D  +   D   AFL  ++ EEV ++ PE +    G + +L K++YGL QA + W D         G+ R+ VD  +         V V ++VDD++V + D+   + +   L  + K+KD+G A   +   V R+   + +K+DQ  Y  S+ +RFG++  + +   +  +  L+     K+ EEK+EM K PY EAVG+ L+    TR DI+ AV  ++RF + PG+
Sbjct:  790 PEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEYSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGK 1083          
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 7.640e-34
Identity = 91/248 (36.69%), Postives = 136/248 (54.84%), Query Frame = 0
Query:   53 EKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHFPGAMGKLNKAIYGLVQAGR-W-----------------ADPGMFRNVVDGGVEVAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVEKTSRIPAMSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETP 282
            E Y+PT A++S+R+L A A  ++  LRHFD++QAF+++D+DE+V + +PE      G + KLNK++YGL QA R W                 AD  +FR + +G V V +VVHVDDI    ++    ++    L     +K+LG+  +Y  C   R+  A  LK+ Q  Y + +   FGVE    IP   G   LS+ D      + EE+  +P+ E +G+ +W    TR DIA AVRAVAR+  +P
Sbjct:   10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQF-GRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASP 249          
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A8H7NVE6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NVE6_9APHY)

HSP 1 Score: 139 bits (351), Expect = 1.340e-33
Identity = 96/297 (32.32%), Postives = 157/297 (52.86%), Query Frame = 0
Query:    6 IARPMDKLVVGTKMLYKRKVNKDGKMEKYQCRLAAQGFPQIKEIHYTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHFPGA---MGKLNKAIYGLVQAGR---------WADPGMFRNVVDGGVE--------VAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVEKTSRIPAMSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETP 282
            + +P    VVG   + ++K +++ ++ K++ RL AQGF Q+  + Y +  +PT  +AS+R++LA AAA D E+   D + A+L  D+DE + +  P  F+  PG    + +L KA+YGL QAGR         + + G+ R+  D GV         + +V+HVDD  +    +  M  L   LG RF++ DLGEA + +   + RNR  R + + Q  Y  ++ +RF +     +           G E  T +E+ EMA+ PY   VG+ ++  + TR DIA AV  +A+F+  P
Sbjct:  255 VEKPKGANVVGCVWVLRKKRDENNEVAKFKARLCAQGFSQVHGVDYDQTAAPTARLASLRLVLALAAANDWEVHQIDFKNAYLNGDLDETIYMRQPPGFE-VPGREDWIWRLLKALYGLKQAGRLWYQKICELFDEIGLSRSCHDFGVFFLFLPGIIIIIVIHVDDCTLVTNTKRIMDDLKKQLGARFEIVDLGEARWLLGFEIHRNRATRTISLSQASYIDTVLDRFHMTDAYTLTIPMDPHVTLHGLEL-TDDERREMARKPYARLVGSLMYAAIGTRPDIAFAVSTLAQFMANP 549          
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.420e-33
Identity = 93/258 (36.05%), Postives = 139/258 (53.88%), Query Frame = 0
Query:   43 FPQIKEIHYTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEIPERFDHFPGAMGKLNKAIYGLVQAGR-W-----------------ADPGMFRNVVDGGVEVAVVVHVDDIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKVDQHMYEQSMAERFGVEKTSRIPAMSGAPALSKGDEAKTPEEKEEMAKFPYGEAVGAPLWTVMMTRSDIACAVRAVARFVETP 282
            F  + E    E Y+PT A++S+R+L A A  ++  LRHFD++QAF+++D+DE+V + +PE      G + KLNK++YGL QA R W                 AD  +FR + +G V V +VVHVDDI    ++    ++    L     +K+LG+  +Y  C   R+  A  LK+ Q  Y + +   FGVE    IP   G   LS+ D      + EE+  +P+ E +G+ +W    TR DIA AVRAVAR+  +P
Sbjct:  174 FRGLMEADCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQF-GRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASP 423          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9987.17562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A446P7W8_TRITD5.630e-3833.22Uncharacterized protein n=3 Tax=Triticum turgidum ... [more]
A0A1Y1IVX6_KLENI2.100e-3633.55Integrase catalytic domain-containing protein (Fra... [more]
A0A401G4V0_9APHY2.290e-3632.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H123_9APHY2.890e-3632.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A1Y1IQX0_KLENI2.570e-3533.55Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A0C9RAA9_9HYME8.420e-3532.31POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
A0A034VP70_BACDO1.140e-3432.31Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JLN0_9PHAE7.640e-3436.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7NVE6_9APHY1.340e-3332.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE1.420e-3336.05Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 131..218
e-value: 5.7E-8
score: 32.7
coord: 7..126
e-value: 5.6E-24
score: 85.1
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..124
NoneNo IPR availablePANTHERPTHR11439:SF287coord: 8..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9987contigH-paniculata_contig9987:141..1073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9987.17562.1mRNA_H-paniculata_contig9987.17562.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9987 60..1578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9987.17562.1 ID=prot_H-paniculata_contig9987.17562.1|Name=mRNA_H-paniculata_contig9987.17562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
MVDNGIARPMDKLVVGTKMLYKRKVNKDGKMEKYQCRLAAQGFPQIKEIH
YTEKYSPTPAIASIRMLLATAAAKDGELRHFDVEQAFLKADVDEEVDIEI
PERFDHFPGAMGKLNKAIYGLVQAGRWADPGMFRNVVDGGVEVAVVVHVD
DIVVHAKDRVTMKWLVTHLGGRFKLKDLGEAEFYMDCHVTRNRKARELKV
DQHMYEQSMAERFGVEKTSRIPAMSGAPALSKGDEAKTPEEKEEMAKFPY
GEAVGAPLWTVMMTRSDIACAVRAVARFVETPGQHTTRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like