Homology
BLAST of mRNA_H-paniculata_contig950.17240.1 vs. uniprot
Match:
D8LEM0_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM0_ECTSI)
HSP 1 Score: 67.8 bits (164), Expect = 3.640e-11
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0
Query: 1 KADQAAAELSQVLRKERAGQARIADAQSEAEELRGEMDSMKETFSRHRNVVRKXXXXXXXXXXXXXXXXXXXQSLTLEAEKQSTRHQQITADAA 94
KAD+ A EL+QVLR+ERAGQ+ IADAQ E +L+ + F++HR VVRK SL+LEA+KQS+RH Q +A+AA
Sbjct: 195 KADRNATELAQVLRRERAGQSSIADAQVEVGDLKAXXXXXXDAFAKHRGVVRKSQEVIDVHEKALKDARSKLLSLSLEADKQSSRHHQASAEAA 288
BLAST of mRNA_H-paniculata_contig950.17240.1 vs. uniprot
Match:
A0A6H5KZW7_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW7_9PHAE)
HSP 1 Score: 65.1 bits (157), Expect = 3.190e-10
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0
Query: 1 KADQAAAELSQVLRKERAGQARIADAQSEAEELRGEMDSMKETFSRHRNVVRKXXXXXXXXXXXXXXXXXXXQSLTLEAEKQSTRHQQITADAA 94
KAD+ A EL+QVLR+ERAGQ+ IADAQ E +L+ E+ M++ F++ VVRK SL+LEA+KQS+RH Q +A+AA
Sbjct: 89 KADRNATELAQVLRRERAGQSSIADAQVEVGDLKAELAEMRDAFAK--GVVRKSQEVINAHEKALKNARSELLSLSLEADKQSSRHHQASAEAA 180
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig950.17240.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
K A D Q A A A E L S Q V L R K E R A G Q A R I A D A Q S E A E E L R G E M D S M K E T F S R H R N V V R K N Q E V I E S H E N A L Q N A R S E L Q S L T L E A E K Q S T R H Q Q I T A D A A A 10 20 30 40 50 60 70 80 90 Expect = 3.64e-11 / Id = 45.74 Expect = 3.19e-10 / Id = 45.74 Sequence D8LEM0_ECTSI A0A6H5KZW7_9PHAE
Match Name E-value Identity Description
D8LEM0_ECTSI 3.640e-11 45.74 PHD-type domain-containing protein n=1 Tax=Ectocar... [more] A0A6H5KZW7_9PHAE 3.190e-10 45.74 PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
K A D Q A A A E L S Q V L R K E R A G Q A R I A D A Q S E A E E L R G E M D S M K E T F S R H R N V V R K N Q E V I E S H E N A L Q N A R S E L Q S L T L E A E K Q S T R H Q Q I T A D A A A 10 20 30 40 50 60 70 80 90 Score = Score = Sequence Coil Coil
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 16..43 None No IPR available COILS Coil Coil coord: 51..85
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_H-paniculata_contig950.17240.1 ID=prot_H-paniculata_contig950.17240.1|Name=mRNA_H-paniculata_contig950.17240.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp back to top