Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR003690 | Transcription termination factor, mitochondrial/chloroplastic | SMART | SM00733 | mt_12 | coord: 19..51
e-value: 6.1E-4
score: 29.1
coord: 239..271
e-value: 0.049
score: 22.8
coord: 167..198
e-value: 0.0049
score: 26.1
coord: 203..234
e-value: 110.0
score: 11.3
coord: 56..88
e-value: 48.0
score: 12.8
coord: 276..307
e-value: 15.0
score: 14.5
coord: 130..162
e-value: 5.7E-6
score: 35.8
coord: 93..125
e-value: 8.2E-4
score: 28.7 |
| IPR003690 | Transcription termination factor, mitochondrial/chloroplastic | PFAM | PF02536 | mTERF | coord: 158..307
e-value: 7.8E-19
score: 67.7
coord: 10..159
e-value: 3.6E-21
score: 75.4 |
| IPR038538 | MTERF superfamily, mitochondrial/chloroplastic | GENE3D | 1.25.70.10 | | coord: 102..311
e-value: 4.7E-37
score: 129.6 |
| None | No IPR available | PANTHER | PTHR13068 | CGI-12 PROTEIN-RELATED | coord: 3..81
coord: 182..231
coord: 235..310
coord: 117..182 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig947.17217.1 ID=prot_H-paniculata_contig947.17217.1|Name=mRNA_H-paniculata_contig947.17217.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=362bp
MWKFAYFEGEVGVSRLQLVKLVERQPQILALDLHHRIRPNVAYLKNELNI
PSERLPGILVAVPGLLWFNIEDTLKPKVRWFTIELMLRRNQLRKIILQHP
QVLTLSLEKNVGPKASWLKIVFGIDDLALRDMIVRHPALLLYSIETVIKP
KMSFLRDEVGLEEIRLRKLLVTTPVLFSYNVETMRSKVSYLQEELQFDCE
DVARVISRTPQLLGYRVASMKAKVAFIMQVLHTNSEETSKIISGSPTVLN
LSIEKNLRLKIDLYVNELGGKPEDVRAAIVGTPSALGYSLTKRTRPRMQV
IRLLGIEPTFEDHFWHLTSYTSVRFNRWLETQVMENLGAERRGDAEVKSR
MKRYLSILHGN* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
|