Homology
BLAST of mRNA_H-paniculata_contig9415.17175.1 vs. uniprot
Match:
A0A6H5JRV5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV5_9PHAE)
HSP 1 Score: 105 bits (261), Expect = 5.960e-26
Identity = 55/91 (60.44%), Postives = 64/91 (70.33%), Query Frame = 0
Query: 55 LPDNELEALTRLHVEDIDCSLTVRPTRTAFDLTFFEEISYSFEIVSAQLTRPPKRPPDS----CRKKCGDKSLETCSCGEKGNGPGRPKQL 141
+PDNELEA LHVEDIDCSL VRPTRTA DL FF E+SYSFEIV+A+L RPPKRPPD+ CR KC + C C + P R ++L
Sbjct: 1 MPDNELEAAKGLHVEDIDCSLVVRPTRTALDLRFFGEVSYSFEIVAARLVRPPKRPPDARSGRCRNKCSPG--KACPCNR--DSPARSRRL 87
BLAST of mRNA_H-paniculata_contig9415.17175.1 vs. uniprot
Match:
D8LC33_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC33_ECTSI)
HSP 1 Score: 105 bits (261), Expect = 2.140e-23
Identity = 55/91 (60.44%), Postives = 64/91 (70.33%), Query Frame = 0
Query: 55 LPDNELEALTRLHVEDIDCSLTVRPTRTAFDLTFFEEISYSFEIVSAQLTRPPKRPPDS----CRKKCGDKSLETCSCGEKGNGPGRPKQL 141
+PDNELEA LHVEDIDCSL VRPTRTA DL FF E+SYSFEIV+A+L RPPKRPPD+ CR KC + C C + P R ++L
Sbjct: 1 MPDNELEAAKGLHVEDIDCSLVVRPTRTALDLRFFGEVSYSFEIVAARLVRPPKRPPDARSGRCRNKCSPG--KACPCNH--DSPARSRRL 87
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9415.17175.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M M E V I E K T Q R K V V V R Q K R H G V L Y G V G A C F L L A L L F Y L L D G K H P K S S L Y C T R H A V L P D N E L E A L T R L H V E D I D C S L T V R P T R T A F D L T F F E E I S Y S F E I V S A Q L T R P P K R P P D S C R K K C G D K S L E T C S C G E K G N G P G R P K Q L N R R N F Q G L Y E S G E A G G E G S S G A P K R R D A R A L E E E E E E 20 40 60 80 100 120 140 160 Expect = 5.96e-26 / Id = 60.44 Expect = 2.14e-23 / Id = 60.44 Sequence A0A6H5JRV5_9PHAE D8LC33_ECTSI
Match Name E-value Identity Description
A0A6H5JRV5_9PHAE 5.960e-26 60.44 Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more] D8LC33_ECTSI 2.140e-23 60.44 RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M M E V I E K T Q R K V V V R Q K R H G V L Y G V G A C F L L A L L F Y L L D G K H P K S S L Y C T R H A V L P D N E L E A L T R L H V E D I D C S L T V R P T R T A F D L T F F E E I S Y S F E I V S A Q L T R P P K R P P D S C R K K C G D K S L E T C S C G E K G N G P G R P K Q L N R R N F Q G L Y E S G E A G G E G S S G A P K R R D A R A L E E E E E E 20 40 60 80 100 120 140 160 Score = Score = Score = Score = Score = Sequence Coil TRANSMEMBRANE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 165..178 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 21..38 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..20 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 39..178 None No IPR available TMHMM TMhelix coord: 21..38
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_H-paniculata_contig9415.17175.1 ID=prot_H-paniculata_contig9415.17175.1|Name=mRNA_H-paniculata_contig9415.17175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp back to top