Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9374.17147.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 12..15 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 135..135 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 85..90 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..3 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 113..117 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 4..11 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 118..134 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 16..65 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..15 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 66..84 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 91..112 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..18
score: 0.46 |
| None | No IPR available | TMHMM | TMhelix | | coord: 91..113 |
| None | No IPR available | TMHMM | TMhelix | | coord: 117..134 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig9374.17147.1 ID=prot_H-paniculata_contig9374.17147.1|Name=mRNA_H-paniculata_contig9374.17147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
MQYVVVFVLSLTCKSIDGLWHCDFVRRQKNSRIEILRLYPRHSVEYKTLI
MFEVCMKSDVSTGKSVKWNMTLILNAGVYILYVQGGPKTRYSAISLSLSL
SLYIYIYIYVLFFSDTTQFSLIFVMLHFFFFLQAG back to top
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