prot_H-paniculata_contig9234.17027.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9234.17027.1
Unique Nameprot_H-paniculata_contig9234.17027.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
BLAST of mRNA_H-paniculata_contig9234.17027.1 vs. uniprot
Match: B7ZGM8_9PHAE (Thioredoxin-like 5 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM8_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 3.370e-48
Identity = 98/181 (54.14%), Postives = 122/181 (67.40%), Query Frame = 0
Query:   59 LVLSAAALDSC-QAFV-SRV----GGNYAGCGGSLQHHQRHGFRASSALSALVAPAPPHHAITYIGNVESSDGFDRVVQDGAREKKVVAVWFQASWCRKCKYIGSRLRHLEEHLPPSLTDNVSVFSLDVNKVAQVPQEQKIKDLPTIKFFAGGQEICSYVAYDRGDVFYGKMEEHLRVAIE 233
            L  + AA+ +C QAFV +RV    G + AG   +       G R  + +SA+ +P       T +GNVE    FDR+V   AR K+VVAVWFQASWCRKCKYIGSRLR L+EHLP  LT+N+ + S+DVNKVA+VPQ QKIKDLPTI+FF  G+E+ SYVA D+G+ FY  ME HLR A E
Sbjct:   15 LAFAVAAVHNCGQAFVLTRVPLAMGASSAGAVATGARRDVGGTR--TPISAIASPVTTKEIQT-VGNVEE---FDRIV---ARPKQVVAVWFQASWCRKCKYIGSRLRRLDEHLPAYLTNNLVLVSIDVNKVAEVPQRQKIKDLPTIQFFVEGKEVGSYVATDKGEAFYSNMERHLRAAQE 186          
BLAST of mRNA_H-paniculata_contig9234.17027.1 vs. uniprot
Match: A0A6H5KPM9_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPM9_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.660e-42
Identity = 86/180 (47.78%), Postives = 111/180 (61.67%), Query Frame = 0
Query:   53 IIYVIGLVLSAAALDSCQAFVSRVGGNYAGCGGSLQHHQRHGFRASSALSALVAPAPPHHAITYIGNVESSDGFDRVVQDGAREKKVVAVWFQASWCRKCKYIGSRLRHLEEHLPPSLTDNVSVFSLDVNKVAQVPQEQKIKDLPTIKFFAGGQEICSYVAYDRGDVFYGKMEEHLRVAI 232
            +  ++ L LSAA      AFV   GGN  G   +    Q  G    + + A+  P      I  + N E  +   R+    AR K+VVA+WF ASWCRKCKYIG+RL+ L+EHLP  L++N+ V S+DVN+VAQVPQ QKIKDLPTI+FF  G  + SYVA DRG+ FY  ME+HLR A+
Sbjct:    7 VAVLVVLSLSAAVAS---AFVP--GGNPGGMAKAAAV-QLEGGGTKTPIRAITHPRTNVKEIASVSNTEEFESLLRL----ARPKQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYLSNNLVVVSIDVNQVAQVPQRQKIKDLPTIQFFVDGGMVGSYVANDRGEAFYANMEKHLRAAL 176          
BLAST of mRNA_H-paniculata_contig9234.17027.1 vs. uniprot
Match: A0A0K1ISH9_HALGI (Thioredoxin n=33 Tax=Haloferax TaxID=2251 RepID=A0A0K1ISH9_HALGI)

HSP 1 Score: 58.9 bits (141), Expect = 9.200e-8
Identity = 31/90 (34.44%), Postives = 54/90 (60.00%), Query Frame = 0
Query:  119 NVESSDGFDRVVQDGAREKKVVAVWFQASWCRKCKYIGSRLRHLEEHLPPSLTDNVSVFSLDVNKVAQVPQEQKIKDLPTIKFFAGGQEI 208
            +VESSD  D ++ D A    VV V + A WC  CK +   +  + E      TD V V  +D++++ ++ +EQ I+ +PT++F+AGG+++
Sbjct:   12 HVESSDHLDELIADNA----VVLVDYHAEWCGPCKMLEPTVEEIAEE-----TDAV-VAKVDIDELQELAREQGIRSVPTLQFYAGGEQV 91          
BLAST of mRNA_H-paniculata_contig9234.17027.1 vs. uniprot
Match: A0A2I4ENV7_JUGRE (thioredoxin H-type-like n=2 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4ENV7_JUGRE)

HSP 1 Score: 53.9 bits (128), Expect = 7.350e-6
Identity = 30/111 (27.03%), Postives = 55/111 (49.55%), Query Frame = 0
Query:  124 DGFDRVVQDGAREKKVVAVWFQASWCRKCKYIGSRLRHLEEHLPPSLTDNVSVFSLDVNKVAQVPQEQKIKDLPTIKFFAGGQEICSYVAYDRGDVFYGKMEEHLRVAIEK 234
            D +   +Q+G   KK+V V+F ASWC  C+ I   L  + + +P      V+   +DV+++  V +E +++ +PT  F   G+ +         D   G  ++ L++ I K
Sbjct:   14 DAWKLHMQNGNESKKLVVVYFTASWCGPCRTIAPILAEIAKKMP-----EVTFLKVDVDELTTVAEEYEVQAMPTFVFLKEGKVV---------DTVVGAKKDELQLTIAK 110          
BLAST of mRNA_H-paniculata_contig9234.17027.1 vs. uniprot
Match: A0A8H7V4W8_9FUNG (Thioredoxin n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7V4W8_9FUNG)

HSP 1 Score: 52.8 bits (125), Expect = 1.430e-5
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 0
Query:  136 EKKVVAVWFQASWCRKCKYIGSRLRHLEEHLPPSLTDNVSVFS-LDVNKVAQVPQEQKIKDLPTIKFFAGGQEICSYVAYDRGDV 219
            + K+V + F A+WC  CK I  +L    E      T + +VF+ +DV+ VA V  E KI+ +PTI FF  GQ++   V  +  ++
Sbjct:   18 QDKLVIIDFHATWCGPCKLIAPKLHKFAE------TYSNAVFAKVDVDDVADVAAECKIRAMPTILFFKNGQQVGEVVGANAANI 96          
BLAST of mRNA_H-paniculata_contig9234.17027.1 vs. uniprot
Match: J3F034_9EURY (Thioredoxin n=2 Tax=Halogranum TaxID=695982 RepID=J3F034_9EURY)

HSP 1 Score: 52.4 bits (124), Expect = 2.300e-5
Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 0
Query:  101 LSALVAPAPPHHAITYIGNVESSDGFDRVVQDGAREKKVVAVWFQASWCRKCKYIGSRLRHLEEHLPPSLTDNVSVFSLDVNKVAQVPQEQKIKDLPTIKFFAGGQEICSYVAY-DRGDV 219
            +S     A P H       VES    D +V     E  VV V F A WC  CK +   L  + E      T+ V V  +D+ ++ +  Q Q I+ +PT+KFFA G+E  + V   D+ D+
Sbjct:    1 MSQTETTATPVH-------VESESHLDELVA----ENDVVLVDFYADWCGPCKMLEPTLEEIAEE-----TEAV-VAKVDIEELQEFAQAQGIRSVPTLKFFAHGEEAKTVVGVQDKADL 103          
BLAST of mRNA_H-paniculata_contig9234.17027.1 vs. uniprot
Match: A0A1H8SNV5_9EURY (Thioredoxin n=1 Tax=Halogranum amylolyticum TaxID=660520 RepID=A0A1H8SNV5_9EURY)

HSP 1 Score: 51.2 bits (121), Expect = 6.030e-5
Identity = 38/120 (31.67%), Postives = 55/120 (45.83%), Query Frame = 0
Query:  101 LSALVAPAPPHHAITYIGNVESSDGFDRVVQDGAREKKVVAVWFQASWCRKCKYIGSRLRHLEEHLPPSLTDNVSVFSLDVNKVAQVPQEQKIKDLPTIKFFAGGQEICSYVAY-DRGDV 219
            +S   A   P H       VE     +R+V     E  VV V F A WC  CK +   L  +        TD V V  +D+ ++ +  Q Q I+ +PT+KFFA G+E  + V   D+ D+
Sbjct:    1 MSETEATGTPIH-------VEDEAHLERLVD----ENDVVLVDFYADWCGPCKMLEPTLEEIAAE-----TDAV-VAKVDIEELQEFAQSQGIRSVPTLKFFANGEEAKTVVGVQDKADL 103          
BLAST of mRNA_H-paniculata_contig9234.17027.1 vs. uniprot
Match: A0A1G9VRV5_9EURY (Thioredoxin n=1 Tax=Halogranum gelatinilyticum TaxID=660521 RepID=A0A1G9VRV5_9EURY)

HSP 1 Score: 51.2 bits (121), Expect = 6.030e-5
Identity = 33/101 (32.67%), Postives = 52/101 (51.49%), Query Frame = 0
Query:  120 VESSDGFDRVVQDGAREKKVVAVWFQASWCRKCKYIGSRLRHLEEHLPPSLTDNVSVFSLDVNKVAQVPQEQKIKDLPTIKFFAGGQEICSYVAY-DRGDV 219
            VES D  + +V D      +V V F A WC  CK +   L  +        TD V V  +D++++ +  + Q I+ +PT+KFFA G+E  S +   D+ D+
Sbjct:   13 VESEDHLNELVADN----DIVLVDFYADWCGPCKMMEPTLEEVAAE-----TDAV-VAKVDIDELQEFAKSQGIRSVPTLKFFADGEEAKSVIGVQDKADL 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9234.17027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
B7ZGM8_9PHAE3.370e-4854.14Thioredoxin-like 5 n=1 Tax=Laminaria digitata TaxI... [more]
A0A6H5KPM9_9PHAE2.660e-4247.78Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A0K1ISH9_HALGI9.200e-834.44Thioredoxin n=33 Tax=Haloferax TaxID=2251 RepID=A0... [more]
A0A2I4ENV7_JUGRE7.350e-627.03thioredoxin H-type-like n=2 Tax=Juglandaceae TaxID... [more]
A0A8H7V4W8_9FUNG1.430e-535.29Thioredoxin n=1 Tax=Mucor plumbeus TaxID=97098 Rep... [more]
J3F034_9EURY2.300e-532.50Thioredoxin n=2 Tax=Halogranum TaxID=695982 RepID=... [more]
A0A1H8SNV5_9EURY6.030e-531.67Thioredoxin n=1 Tax=Halogranum amylolyticum TaxID=... [more]
A0A1G9VRV5_9EURY6.030e-532.67Thioredoxin n=1 Tax=Halogranum gelatinilyticum Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 123..215
e-value: 6.0E-14
score: 51.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 102..235
score: 8.994
NoneNo IPR availableGENE3D3.40.30.10coord: 111..232
e-value: 1.1E-15
score: 59.5
NoneNo IPR availablePANTHERPTHR47192:SF3THIOREDOXIN-LIKE 3-1, CHLOROPLASTICcoord: 87..210
NoneNo IPR availablePANTHERPTHR47192FAMILY NOT NAMEDcoord: 87..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..48
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 117..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9234contigH-paniculata_contig9234:1376..5889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9234.17027.1mRNA_H-paniculata_contig9234.17027.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9234 1257..5978 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9234.17027.1 ID=prot_H-paniculata_contig9234.17027.1|Name=mRNA_H-paniculata_contig9234.17027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MHTHHDVSSIVPAQPNLTQQLCTPPPTQQPSRFGIYRMALRSRSIRRRGY
KMIIYVIGLVLSAAALDSCQAFVSRVGGNYAGCGGSLQHHQRHGFRASSA
LSALVAPAPPHHAITYIGNVESSDGFDRVVQDGAREKKVVAVWFQASWCR
KCKYIGSRLRHLEEHLPPSLTDNVSVFSLDVNKVAQVPQEQKIKDLPTIK
FFAGGQEICSYVAYDRGDVFYGKMEEHLRVAIEKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf