prot_H-paniculata_contig9106.16940.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9106.16940.1
Unique Nameprot_H-paniculata_contig9106.16940.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length366
Homology
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BLAST of mRNA_H-paniculata_contig9106.16940.1 vs. uniprot
Match: D7FU43_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU43_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 2.180e-76
Identity = 166/371 (44.74%), Postives = 223/371 (60.11%), Query Frame = 0 
Query:    1 MDYNKLQDSMRRAVHKES----RGAG------ARSIEATFELTPAFCTGD-GRAPLGGLMNDQSRRQVEELERENASLRSLLVDLKADVAELRGYHDRHGDLVSA--GRTVATGDWEDDTAVNPVTERAIEGMPSDWLQRRLGDETARQVLVMRGALMRVLGEGRFAEESAVMKDANVVDHGRYTDVMAQLKEARSLLREQDVIMLAAIFDRPGAESAISTGRERCVCGAGSDPDGTVGSIIWDTRERLDQEXXXXXXXXXXXXXXXXKFLEEAVRRDRKSFVYSVPPSTPGSPLDSRGAGSSGWGGDVKVSTPVNWHRHLATTGTLMVPT-TPCHAGVE-EASCLPLMTFTPPGASPETTRLLGELGINP 356
            ++Y +LQDS+RRAV K S    RGAG      +R IE+  EL+P   T + G+ PLG ++N+Q+  +V ELE EN +LR++L DL+ +V EL+ Y DRHGDLVSA  G     G W    +V+P+ E  IEGMP+DWL+R+ G+E ARQ+  MR A+ RVLGEG   +E     D+   +    T +++QL+EARSLLREQD IM AAIFD+PGA ++ +  ++RC+ G G D     GS  WD+ ERL+Q+                KFLEEAV RD KSFV++ PP+TP +              D + +TPV+ H      G L V   +P   G   EA  L  M+FTPP ASP+TT+LLG LGI P
Sbjct:  268 VEYGRLQDSLRRAVEKGSGVVSRGAGKGGSKCSRGIESNLELSPGAATTEAGKHPLGAVLNNQAESKVGELEGENFALRNMLQDLQREVMELKDYQDRHGDLVSAERGSIEGGGIWGGRMSVDPLAEEVIEGMPADWLERQFGEENARQMKGMRCAVKRVLGEGE--QEGGSADDSMSAED--VTSLVSQLREARSLLREQDAIMFAAIFDKPGAGTSAAN-KDRCMFG-GDDGVYLGGSGAWDSLERLEQQREELGKERLKLEADKAKFLEEAVHRDSKSFVFACPPATPTA--------------DSRYATPVHHHGKALGNGKLTVAAASPAPNGRGGEAGNLSRMSFTPPTASPDTTKLLGALGIVP 618
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9106.16940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU43_ECTSI2.180e-7644.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 229..260
NoneNo IPR availableCOILSCoilCoilcoord: 50..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9106contigH-paniculata_contig9106:1071..6312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9106.16940.1mRNA_H-paniculata_contig9106.16940.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9106 997..8616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9106.16940.1 ID=prot_H-paniculata_contig9106.16940.1|Name=mRNA_H-paniculata_contig9106.16940.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=366bp
MDYNKLQDSMRRAVHKESRGAGARSIEATFELTPAFCTGDGRAPLGGLMN
DQSRRQVEELERENASLRSLLVDLKADVAELRGYHDRHGDLVSAGRTVAT
GDWEDDTAVNPVTERAIEGMPSDWLQRRLGDETARQVLVMRGALMRVLGE
GRFAEESAVMKDANVVDHGRYTDVMAQLKEARSLLREQDVIMLAAIFDRP
GAESAISTGRERCVCGAGSDPDGTVGSIIWDTRERLDQEREELEHERARL
EQDKAKFLEEAVRRDRKSFVYSVPPSTPGSPLDSRGAGSSGWGGDVKVST
PVNWHRHLATTGTLMVPTTPCHAGVEEASCLPLMTFTPPGASPETTRLLG
ELGINPGNASPYREV*
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