prot_H-paniculata_contig9101.16938.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9101.16938.1
Unique Nameprot_H-paniculata_contig9101.16938.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length867
Homology
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BLAST of mRNA_H-paniculata_contig9101.16938.1 vs. uniprot
Match: D8LBM0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM0_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 5.760e-50
Identity = 84/122 (68.85%), Postives = 98/122 (80.33%), Query Frame = 0 
Query:  200 TYVVLVCESPRCNKNPSFAPRGETRRRFCKRHAGPGMVNIYYKYCDV--GKCPERATFEAGNELRCLAHKEAGMKPRRNICQVPGGGCTRQSSYGRDGGKPVVCTVHREDGMVQVRTKTCKH 319
            T  +L CESP CNK PSFA RG+TRRRFCKRHA PGM N+YYKYCD   G+CPERA++E+  +LRCL H E  M+PR NICQV GGGC RQSS+G  GGKPV+CT+H+  GMVQVRTKTC+H
Sbjct:   43 TGALLTCESPLCNKTPSFAHRGQTRRRFCKRHAWPGMQNVYYKYCDADSGRCPERASYESAGKLRCLQHCEPEMRPRNNICQVEGGGCDRQSSFGAKGGKPVLCTLHKGAGMVQVRTKTCRH 164
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BLAST of mRNA_H-paniculata_contig9101.16938.1 vs. uniprot
Match: A0A6H5JA62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA62_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 3.140e-47
Identity = 81/122 (66.39%), Postives = 96/122 (78.69%), Query Frame = 0 
Query:  200 TYVVLVCESPRCNKNPSFAPRGETRRRFCKRHAGPGMVNIYYKYCDV--GKCPERATFEAGNELRCLAHKEAGMKPRRNICQVPGGGCTRQSSYGRDGGKPVVCTVHREDGMVQVRTKTCKH 319
            T  +L CESP CNK  SFA RG+TRRR CKRHA PGM N+YYKYCD   G+CPERA++E+  +LRCL H E  M+PR NICQV GGGC RQSS+G  GGKP++CT+H+  GMVQVRTKTC+H
Sbjct:  114 TGALLTCESPLCNKTSSFAHRGQTRRRLCKRHAWPGMQNVYYKYCDADSGRCPERASYESAGKLRCLEHCEPEMRPRNNICQVEGGGCDRQSSFGVKGGKPILCTLHKGAGMVQVRTKTCRH 235
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9101.16938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBM0_ECTSI5.760e-5068.85EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JA62_9PHAE3.140e-4766.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9101contigH-paniculata_contig9101:273..7651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9101.16938.1mRNA_H-paniculata_contig9101.16938.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9101 112..8064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9101.16938.1 ID=prot_H-paniculata_contig9101.16938.1|Name=mRNA_H-paniculata_contig9101.16938.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=867bp
MDRSSTFMSSADWNMVTVPAAGATAEAMKVPRKKQGGGDDGSVTASSAAS
SASASVSDQRTPSLSVLQPDLGSEAVAVVMGTGKSLYCEMSDCCQRSALW
REVANRKRLVCQQHREKGVAYSQLVPICAEKGCFEEVPSFSSTISSSGQR
QYCVRHTADRMAAGQARPRHCGAPGCDKVASYGIGGRRGMCREHKREGMT
YVVLVCESPRCNKNPSFAPRGETRRRFCKRHAGPGMVNIYYKYCDVGKCP
ERATFEAGNELRCLAHKEAGMKPRRNICQVPGGGCTRQSSYGRDGGKPVV
CTVHREDGMVQVRTKTCKHQGCEKIPSYGYPCMSRDYCKPHALEGMVYSA
GKRCRFRGCHAVGVFNYPAVGGGAFCIKHKEDGMINIQPTKCEEIGCKYG
ASFGDAQQRKKRFCARHKSQGMVNVQNLLAEMTDVPGDMSSASGSSGARQ
NPATRSDSAMLADTLEAACADSAEQGVRGSTAGTASWQSAIGPSWSNVRS
RGTLAEATSPQPPPPSSADRDSVTPVGTSPPAAPAAQGLCLSSQNRTRAH
AAAQSCSTRISKRARKQTTTATASAIAGAAHPSAAAMVVPASSLGAGVGV
TLQAADASVSRLATFTTTTPQQLEAASSLRISRPTGPGTGGAAFSEPLVS
PPRGLQSLANATTAAEIPSGSRDSDDLAHVFDSLKRINRLMSSADIPGPS
GCSGHDDRGPQVTDKTSAAAMLSPSPRVVDRITRMKGEFKRAAGFGGVYR
SGGADLAGGLRVVSLEAAAAARYVSTIATTSASASSGVSAAQGTSVAVSR
HSDSADNGPSGGGDGRQGQEDRRVKSFKQGKDAFLSSLLGMMDPADPTTI
RVRGAMMARLSSIATT*
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