prot_H-paniculata_contig9020.16865.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9020.16865.1
Unique Nameprot_H-paniculata_contig9020.16865.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length217
Homology
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: D7FX60_ECTSI (WD40 repeat-containing protein SMU1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX60_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 9.450e-74
Identity = 153/206 (74.27%), Postives = 163/206 (79.13%), Query Frame = 0
Query:   12 KVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGSHTEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQGQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPHR 217
            KVSTGQCLRRFESAHTQGVT                               KEFRG    XXXXXXXXXXXXXXXXXXXXXXXXXXXX TENLH+FHPA+SIGSHTEASVHTV PLPGS EQVLVSNRTSTAFLCTLQGQVVRSFTSPK+ RADFTCACLSPKGRW YC GEDGE+ CFDAAT E+E+++KVS+KE+IGLAHHPHR
Sbjct:  294 KVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTENLHTFHPALSIGSHTEASVHTVRPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHR 499          
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: A0A7J9AVG4_9ROSI (WD40 repeat-containing protein SMU1 n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9AVG4_9ROSI)

HSP 1 Score: 194 bits (494), Expect = 5.890e-59
Identity = 134/208 (64.42%), Postives = 162/208 (77.88%), Query Frame = 0
Query:   10 VWKVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGSHTEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQGQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPHR 217
            VW++ TGQCLRR E AH+QGVTSL F+RDGSQLLS+S D TARIHGLKSGK+LKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   L +F P  ++    +ASV++V   P +T+ ++V N+TS+ ++ TLQGQVV+SF+S K    DF  AC+SPKG W YCVGED  M CF   T +LE  + V +K+VIG+ HHPHR
Sbjct:   21 VWRIRTGQCLRRLERAHSQGVTSLVFSRDGSQLLSTSFDSTARIHGLKSGKLLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLQTFKPPPTLRGG-DASVNSVHLFPKNTDHIIVCNKTSSIYIMTLQGQVVKSFSSGKKEGGDFVAACVSPKGEWIYCVGEDRNMYCFSYQTGKLEHLMTVHEKDVIGITHHPHR 227          
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: A0A834YBW9_9MAGN (WD40 repeat-containing protein SMU1 n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A834YBW9_9MAGN)

HSP 1 Score: 199 bits (505), Expect = 1.050e-55
Identity = 136/214 (63.55%), Postives = 168/214 (78.50%), Query Frame = 0
Query:    4 QDGKIKVWKVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGSHTEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQGQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPHR 217
            ++G  +VW++ TGQCLRR E AH+QGVTSL F+RDGSQLLS+S D TARIHGLKSGK+LKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + L +F P   +    +ASV++V   P +T+ ++V N+TS+ +L TLQGQVV+SF+S K    DF  AC+SPKG W YCVGED  M CF   + +LE  +KV +K+VIG++HHPHR
Sbjct:  586 EEGHWEVWRLRTGQCLRRLERAHSQGVTSLVFSRDGSQLLSTSFDSTARIHGLKSGKLLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCLQTFKPPPPLRGG-DASVNSVHLFPKNTDHIIVCNKTSSIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNMYCFSYQSGKLEHLMKVHEKDVIGVSHHPHR 798          
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: G1QBV3_MYOLU (WD40 repeat-containing protein SMU1 n=3 Tax=Boreoeutheria TaxID=1437010 RepID=G1QBV3_MYOLU)

HSP 1 Score: 187 bits (476), Expect = 3.060e-55
Identity = 115/216 (53.24%), Postives = 149/216 (68.98%), Query Frame = 0
Query:    4 QDGKIKVWKVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGSH--TEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQGQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPHR 217
            QDGKIKVWK+ +GQCLRRFE AH++GVT L+F++D SQ+LS+S DQT RIHGL+ GK LKEF           XXXXXXXXXXXXXXXX        TE  ++F    S+GS   T+ +V++V  LP + E ++V NR++T  +  +QGQ+VRSF+S K    DF C  LSP+G W YCVGED  + CF   T  LER++ V +K+VIG+AHHPH+
Sbjct:   95 QDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLRPGKTLKEFCDHSSFVNEATXXXXXXXXXXXXXXXXVNIWNRKTTECSNTFK---SLGSTAGTDITVNSVILLPKNPEHLVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGTLERTLTVHEKDVIGVAHHPHQ 307          
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: W5PIJ8_SHEEP (WD40 repeat-containing protein SMU1 n=121 Tax=Euteleostomi TaxID=117571 RepID=W5PIJ8_SHEEP)

HSP 1 Score: 192 bits (489), Expect = 3.230e-55
Identity = 137/222 (61.71%), Postives = 170/222 (76.58%), Query Frame = 0
Query:    1 TTTQDGKIK---VWKVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGSH--TEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQGQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPHR 217
            T  QDGKIK   VWK+ +GQCLRRFE AH++GVT L+F++D SQ+LS+S DQT RIHGLKSGK LKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTE  ++F    S+GS   T+ +V++V  LP + E  +V NR++T  +  +QGQ+VRSF+S K    DF C  LSP+G W YCVGED  + CF   T +LER++ V +K+VIG+AHHPH+
Sbjct:  281 TGAQDGKIKKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTECSNTFK---SLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQ 499          
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: A0A5A7PYB3_STRAF (WD40 repeat-containing protein SMU1 (Fragment) n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PYB3_STRAF)

HSP 1 Score: 191 bits (484), Expect = 2.390e-54
Identity = 129/209 (61.72%), Postives = 164/209 (78.47%), Query Frame = 0
Query:    8 IKVWKVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGSHTEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQGQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPH 216
            ++VW++ TGQCLRR E AH++GVTS++F+RDG+QLLS+S D TARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T+ + +  P   +    +ASV++V   P + + ++V N+TS+ ++ TLQGQVV+SF+S K    DF  AC+SPKG W YCVGED  + CF   + +LE  +KV +K+VIGLAHHPH
Sbjct:  307 LQVWRIRTGQCLRRLERAHSEGVTSVSFSRDGTQLLSTSFDSTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTDCVQTIKPPPPLRGG-DASVNSVHLFPKNADHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFMAACVSPKGEWIYCVGEDRNLYCFSYQSGKLEHLMKVHEKDVIGLAHHPH 514          
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: H2SDZ4_TAKRU (WD40 repeat-containing protein SMU1 n=28 Tax=Neopterygii TaxID=41665 RepID=H2SDZ4_TAKRU)

HSP 1 Score: 188 bits (477), Expect = 1.130e-53
Identity = 126/210 (60.00%), Postives = 161/210 (76.67%), Query Frame = 0
Query:    8 IKVWKVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGSHTEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQGQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPHR 217
            ++VWK+ +GQCLRRFE AH++GVT ++F +D SQLLS+S DQT RIHGLKSGK LKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TE  ++F P +   + T+ +V+ +  LP + E  +V NR++T  +  +QGQ+VRSF+S K    DF C  LSP+G W YCVGED  + CF   T +LER++ V +K+VIG+AHHPH+
Sbjct:  265 VQVWKIQSGQCLRRFERAHSKGVTCVSFCKDSSQLLSTSFDQTIRIHGLKSGKTLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTECTNTFKP-LGTSAGTDITVNNILLLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQ 473          
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: UPI001BB230D8 (WD40 repeat-containing protein SMU1-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB230D8)

HSP 1 Score: 180 bits (456), Expect = 3.230e-52
Identity = 101/200 (50.50%), Postives = 137/200 (68.50%), Query Frame = 0
Query:   17 QCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGSHTEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQGQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPH 216
            QCLRRFE+AH++GVTS+ F++D +Q+LSSS DQT RIHGLKSGK LKEFRG                  XXXXXXXXXX     TE +++F  ++   S T+ +V++V P P + EQ +V NR++T  +  +QGQ+VRSF+S K    DFTC+CLSP+G W YC+GED  + CF  +T +LER++ V +K+VIG+  HPH
Sbjct:  110 QCLRRFENAHSKGVTSVKFSKDATQILSSSFDQTLRIHGLKSGKTLKEFRGHTSFVNEAIFAPDGHLAIXXXXXXXXXXWNIKTTECINTFK-SLGGSSATDITVNSVLPYPKNAEQFVVCNRSNTVAIMNMQGQIVRSFSSGKREGGDFTCSCLSPRGEWIYCIGEDLVLYCFSTSTGKLERTLTVHEKDVIGIVPHPH 308          
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: H2ZBU6_CIOSA (WD40 repeat-containing protein SMU1 n=2 Tax=Ciona savignyi TaxID=51511 RepID=H2ZBU6_CIOSA)

HSP 1 Score: 182 bits (462), Expect = 3.580e-51
Identity = 130/219 (59.36%), Postives = 168/219 (76.71%), Query Frame = 0
Query:    4 QDGKIKVWKVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGS-HTEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQ-----GQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPH 216
            Q+GKIKVWK+STGQCLRRFE AH++G+TS++F++DGSQ+LS+S D T +IHGLKSGK LKE RGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTE +++F    S+G+   + +V++V  LP + E  +V NR+ST  +  +Q     GQ VRSF+S K    DF CA +SP+G W YCV ED  + CF  ++ +LER++ V +K+VIG+ HHPH
Sbjct:  293 QEGKIKVWKMSTGQCLRRFERAHSKGITSVSFSKDGSQVLSASFDHTIKIHGLKSGKTLKEMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTECVNTFK---SLGAGQQDVTVNSVHLLPKNPEHFVVCNRSSTVSIMNMQDSITQGQTVRSFSSGKREGGDFVCATVSPRGEWIYCVAEDKVLYCFSTSSGKLERTLTVHEKDVIGITHHPH 508          
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Match: A0A4U5M3X0_STECR (Uncharacterized protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5M3X0_STECR)

HSP 1 Score: 174 bits (441), Expect = 4.250e-51
Identity = 119/219 (54.34%), Postives = 153/219 (69.86%), Query Frame = 0
Query:    1 TTTQDGKIKVWKVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENLHSFHPAVSIGSHTEASVHTVFPLPGST--EQVLVSNRTSTAFLCTLQGQVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERSIKVSDKEVIGLAHHPHR 217
            T ++DGKIK+WK+ TGQCLRR E AH +GVTS+ F++D S +LS+S DQT RIHG+KSGK LKE RG       XXXXXXXXXXXXXXXXXXXXXXXXXX    ++F  +       E SV  V PLP  T  +QV+V NR+ST ++  +QGQ+VR+ TS K  + DF  + LSP+  W YC GEDG + CF   +  LE ++ + +K+V+GLAHHPH+
Sbjct:    4 TGSKDGKIKLWKMLTGQCLRRIEKAHLKGVTSVQFSKDHSHILSASYDQTVRIHGVKSGKCLKEMRGHSSFVKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTFRIS------GETSVVNVIPLPKVTFGDQVVVVNRSSTVYVINIQGQIVRTLTSGKRDKGDFVASLLSPRAEWLYCAGEDGVLYCFSMLSGNLESALPIHEKQVLGLAHHPHQ 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9020.16865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX60_ECTSI9.450e-7474.27WD40 repeat-containing protein SMU1 n=2 Tax=Ectoca... [more]
A0A7J9AVG4_9ROSI5.890e-5964.42WD40 repeat-containing protein SMU1 n=2 Tax=Gossyp... [more]
A0A834YBW9_9MAGN1.050e-5563.55WD40 repeat-containing protein SMU1 n=2 Tax=Magnol... [more]
G1QBV3_MYOLU3.060e-5553.24WD40 repeat-containing protein SMU1 n=3 Tax=Boreoe... [more]
W5PIJ8_SHEEP3.230e-5561.71WD40 repeat-containing protein SMU1 n=121 Tax=Eute... [more]
A0A5A7PYB3_STRAF2.390e-5461.72WD40 repeat-containing protein SMU1 (Fragment) n=1... [more]
H2SDZ4_TAKRU1.130e-5360.00WD40 repeat-containing protein SMU1 n=28 Tax=Neopt... [more]
UPI001BB230D83.230e-5250.50WD40 repeat-containing protein SMU1-like isoform X... [more]
H2ZBU6_CIOSA3.580e-5159.36WD40 repeat-containing protein SMU1 n=2 Tax=Ciona ... [more]
A0A4U5M3X0_STECR4.250e-5154.34Uncharacterized protein n=1 Tax=Steinernema carpoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 58..97
e-value: 1.4E-8
score: 44.5
coord: 15..55
e-value: 1.4E-6
score: 37.9
coord: 149..191
e-value: 2.9
score: 14.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 60..97
e-value: 2.3E-6
score: 28.2
coord: 16..53
e-value: 2.7E-5
score: 24.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 23..64
score: 10.642
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..21
score: 9.673
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 65..106
score: 15.956
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..217
e-value: 1.3E-42
score: 147.7
NoneNo IPR availablePANTHERPTHR22848:SF2WD40 REPEAT-CONTAINING PROTEIN SMU1coord: 1..217
NoneNo IPR availablePANTHERPTHR22848WD40 REPEAT PROTEINcoord: 1..217
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 84..98
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..106
score: 28.08
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9020contigH-paniculata_contig9020:943..3851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9020.16865.1mRNA_H-paniculata_contig9020.16865.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9020 943..3851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9020.16865.1 ID=prot_H-paniculata_contig9020.16865.1|Name=mRNA_H-paniculata_contig9020.16865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp
TTTQDGKIKVWKVSTGQCLRRFESAHTQGVTSLAFARDGSQLLSSSMDQT
ARIHGLKSGKMLKEFRGHTSYVNTAVYMLDGAKVVTGSADGTVKVWDAKT
TENLHSFHPAVSIGSHTEASVHTVFPLPGSTEQVLVSNRTSTAFLCTLQG
QVVRSFTSPKTARADFTCACLSPKGRWAYCVGEDGEMLCFDAATAELERS
IKVSDKEVIGLAHHPHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf