prot_H-paniculata_contig899.16842.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig899.16842.1
Unique Nameprot_H-paniculata_contig899.16842.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length625
Homology
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BLAST of mRNA_H-paniculata_contig899.16842.1 vs. uniprot
Match: A0A6H5L932_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L932_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 8.430e-6
Identity = 78/236 (33.05%), Postives = 100/236 (42.37%), Query Frame = 0 
Query:   36 DNGSGFREWSAFDDSPPRPEVGHPARGPPGAAGVPPGRHPPGRMPRRSPEDAGPVVLGINSIDPHMPPGLVPGPRDRELMGPPARQRRRQVRPHPDDPYYDDRFEEPMPGRRPPRPGGRQDELLPPPRGGYDEEPFYDERSRMPRGGPLSQYPQQPGRM-EKRSVERAFGAFDAMEVQHGASPQMKARPQQRMSTEFCAPGEELRLGFDGGMEQ-EYRHERLY--GPPPGRGGPGP 267
            D GSGF+EWSAFD+SPPR     P R P GA       HP    P       GP  +G    + H   G+ P     +    P R RRR+ RP        D++E+   G  PPR   + +EL+P  R                         Q P RM +KR  E      DA E +    P ++ RP  R   EF  PG++ R G     +Q ++R E  Y  GPP G GG GP
Sbjct: 1297 DGGSGFQEWSAFDESPPR--AAPPRRAPMGAPAGGGRGHPXXXXPXXXXXXRGPGRMGPPQGE-HPERGMPPHGEYYDGAERPLRMRRREARPXXXXXXXXDQYEDA--GYYPPRGPRQPEELMPQARRASXXXXXXXXXXXX--XXXXXXXXQHPERMPDKRRYE------DAFEDEPMRGPPLRNRPDPR---EFTGPGDDPRHGSGLDPQQYDFRQEDRYAQGPPRGSGGRGP 1516
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig899.16842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L932_9PHAE8.430e-633.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig899contigH-paniculata_contig899:14653..20016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig899.16842.1mRNA_H-paniculata_contig899.16842.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig899 14653..20017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig899.16842.1 ID=prot_H-paniculata_contig899.16842.1|Name=mRNA_H-paniculata_contig899.16842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=625bp
EHFPPPREALPPAGPDDWSPERGGDGAGWGARGGGDNGSGFREWSAFDDS
PPRPEVGHPARGPPGAAGVPPGRHPPGRMPRRSPEDAGPVVLGINSIDPH
MPPGLVPGPRDRELMGPPARQRRRQVRPHPDDPYYDDRFEEPMPGRRPPR
PGGRQDELLPPPRGGYDEEPFYDERSRMPRGGPLSQYPQQPGRMEKRSVE
RAFGAFDAMEVQHGASPQMKARPQQRMSTEFCAPGEELRLGFDGGMEQEY
RHERLYGPPPGRGGPGPPDTPMGHPLPGPGPGPGPGGRRGEDMMRGRPPP
QEQGRSGRYPNHRQHDGPPMRGEPMRGDPAFRGGGGGPRGGPGGVGPGPD
YGPGPHSGPGGPGPGPSGRGPPPSRGPDPMTRQGSSDVEVPGDHGYGRGP
PPSRGPGLMARPGSPDQDGPADTKFYGRGEPGLGPPQQQLHGPPGTARGT
RGPPSSDHFGPGAPPGERGAHERGSPYERGPHERGPPRERGPLHERGPPH
ERGPPQERVPPQERGPPQERGPPQEHVPPQERGPPHERGPPHERGPPHEF
GPRRERGPPRVSEGGVSDRDPMDRGPHSRGRSRDHDRRPGGPGGGRGRNG
GRGGIPGGGRGAPPPPGARDGRGGR
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