prot_H-paniculata_contig8986.16836.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8986.16836.1
Unique Nameprot_H-paniculata_contig8986.16836.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length836
Homology
BLAST of mRNA_H-paniculata_contig8986.16836.1 vs. uniprot
Match: A0A6H5K008_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K008_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.070e-30
Identity = 132/408 (32.35%), Postives = 197/408 (48.28%), Query Frame = 0
Query:    1 MRHALENLHMDTLVVTSAATLALRYA-RLHAPEGLARRRPNNLS------STNKSKRRKP-----------------GEKGRPEGRRKQGVTAYLLSFTTLHLASKYHEVYEKQLEDLGITVAPTKIYKLGLEISLCSSMGAALNASFRANPLTFQSLFCDMTNQTAIVRMCSEWFALCLSLVSPAQHGDEDERREISSPTPQQHQAPHYKPPLVAFS-PVSPA---------ATAPLTRASSISTP-----------------------ATSGFFCTDLGGKKHTQQI------QICRRSDSDSWAGLTREAGLAIGAVVLARRLSRSPGPCLPVDLRSAVGLKNDEDALRLVAQGIRVARKALDIESGEENGADSTDSDSKTSGPGR----FLAGELVFDRTIDAP 341
            M+ ALEN H+D  VVTSA TLALR+  R H    LA   P  ++      S +  +RR+P                 G  G P           LLS T LHLASKYH   +  LED G  V   +++ LG +ISL  SMGA LNASFRAN  + Q+L C ++ ++ +V+ CSEW +LCL L+      DED   E  +  P  H    + P L A + P++PA         + AP + AS+ +TP                       +T+      L      + +      Q  +    D     +R   LA+ ++VLARRL+R+ GPCLP  +++ +GL  D DAL LV++G+R+AR+A + E  +++      + +  +  G     FL GE++ ++ ++ P
Sbjct:   97 MKSALENRHIDAQVVTSATTLALRWLQRRHLYPSLASS-PGAMNFSTVSNSAHSQRRRQPIPSXXXXXXXXXXXSVGGSAGLPP--------LELLSMTCLHLASKYH-TQDSVLEDFGSCVHRPEVHALGFDISL--SMGAVLNASFRANAFSLQTLLCALSGESPVVKACSEWVSLCLVLLLHPY--DEDSEHETGASPP--HGRRVFSPALSASTAPLTPAPGGPTETPGSQAPSSSASATATPVTPAGASXXXXXXXXXXXXXXXXSTAAAVAWSLRNPDDGESVAPPAPHQQQQGKAGDVRGRFSRATVLALASLVLARRLARAGGPCLPPRVQATMGL-GDGDALLLVSEGLRLARRAFETELCDDSQLQQHSATAAAAEGGLRRKDFLGGEVLLEKKVEGP 487          
BLAST of mRNA_H-paniculata_contig8986.16836.1 vs. uniprot
Match: D7FYP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP4_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 5.810e-27
Identity = 123/357 (34.45%), Postives = 166/357 (46.50%), Query Frame = 0
Query:    1 MRHALENLHMDTLVVTSAATLALRYA-RLHAPEGLARRRPNNLSSTNKSKRRKPGEKGRPEGRR---------------KQGVTAY-LLSFTTLHLASKYHEVYEKQLEDLGITVAPTKIYKLGLEISLCSSMGAALNASFRANPLTFQSLFCDMTNQTAIVRMCSEWFALCLSLVSPAQHGDEDERREISSPTPQQHQAPHYKPPLVAFSPVSPAATAPLTRASS-----------------ISTPATSGFFCTDLG------------GKK------HTQQIQICRRSDSDSWAGLTREAGLAIGAVVLARRLSRSPGPCLPVDLRSAVGLKNDEDALRLVAQGIRVARKALDIE 305
            M+ ALE+ H+D  VV SA TLALR+  R H    LA   P   + T  S                               +G+    LLS T LHLASKYH   +  LED G  V   +++ LG +ISL  SMGA LNASFRAN ++ Q+L C ++ ++ +V+ CSEW +LCL L+      D +     S P  ++            FSP   AATAPLT A                    STP T     T               GK       H QQ Q  +  D       +R   LA+ ++VLARRL+R+ G CLP  +++ +GL  D DAL LV++G+R+AR+A + E
Sbjct:  109 MKSALEDRHIDAQVVASATTLALRWLQRRHMYPSLASS-PGATNGTTVSNNAXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGLPPLELLSMTCLHLASKYH-TQDSVLEDFGSCVHRPEVHALGFDISL--SMGAVLNASFRANAVSLQTLLCALSGESPVVKACSEWVSLCLVLLLHPYDVDSENETGASPPHGER-----------VFSPSLSAATAPLTPAPGGPAETPGSQAPSSXXXXTSTPFTPAGASTTTAAAVAWSLRNPDDGKSVAPPAPHQQQQQHGKAGDVRG--RFSRATVLALASLVLARRLARAGGACLPPRVQATMGL-GDGDALLLVSEGLRLARRAFETE 447          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8986.16836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K008_9PHAE1.070e-3032.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYP4_ECTSI5.810e-2734.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..835
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8986contigH-paniculata_contig8986:2146..5485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8986.16836.1mRNA_H-paniculata_contig8986.16836.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8986 1973..6527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8986.16836.1 ID=prot_H-paniculata_contig8986.16836.1|Name=mRNA_H-paniculata_contig8986.16836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=836bp
MRHALENLHMDTLVVTSAATLALRYARLHAPEGLARRRPNNLSSTNKSKR
RKPGEKGRPEGRRKQGVTAYLLSFTTLHLASKYHEVYEKQLEDLGITVAP
TKIYKLGLEISLCSSMGAALNASFRANPLTFQSLFCDMTNQTAIVRMCSE
WFALCLSLVSPAQHGDEDERREISSPTPQQHQAPHYKPPLVAFSPVSPAA
TAPLTRASSISTPATSGFFCTDLGGKKHTQQIQICRRSDSDSWAGLTREA
GLAIGAVVLARRLSRSPGPCLPVDLRSAVGLKNDEDALRLVAQGIRVARK
ALDIESGEENGADSTDSDSKTSGPGRFLAGELVFDRTIDAPDVCNDFMTA
DRETTATKRATLLTLLTTEYDYRRLAETARNDRDFKTEQGSSLSARARHS
SPPSGFDATPIGDNYSEECQGPIRPKAFPLWKCWRKQRSPDDNPGADRNN
LTYSSSSRDTSIAHQGRDMSPGTNSSQGVMKMILADYMPEEPSSEDYCTL
SALRPSSFDPSFDAQQGRALDKHLQTPMEQEGSDGSDSPPSFNYEATVRA
AAECLLDTGTGSSPPLPHQRPPPRLQSPSVAASAMHDPILTALDAVEKIR
PENTQKNLGKRSSTDGWSSTEDGRKEPSTQVTLRCCERTNTKLGIEQDGQ
AARCRTLRRSSPPIRTLEQERLDRWDLLANKILAALEDGCGCSFCKLGTE
LVTRGKMDRQCDEEIHTITDQSTFAGSVLAASISSSERTNTRRPNNEVME
IVVPLSNAMGIAEAGTAAATTTEITTSKMAESVEARDSVVLTDRQPQKDA
RLDSVSDVLVTSGTQRLAETGNVMAEFIEGTRVLT*
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