prot_H-paniculata_contig898.16831.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig898.16831.1
Unique Nameprot_H-paniculata_contig898.16831.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length257
Homology
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.580e-63
Identity = 210/245 (85.71%), Postives = 219/245 (89.39%), Query Frame = 0
Query:    6 SIETFVGFKAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVVDCGSFDRRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGYILASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFMELFCATAPDTTPTRYATW 250
            S+ +F  FKAHEFVAH+GK NCVA+GPRSGQ          A     +RVNVW+IGRASSIWSLTGNSSAIESL FDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTV+DCGSFDRRF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDG+ILASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EFMELFC TAPDT PTR  T+
Sbjct:    8 SLGSFAAFKAHEFVAHAGKTNCVAVGPRSGQ--------VLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGHILASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTRAITF 244          
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 2.560e-62
Identity = 151/245 (61.63%), Postives = 160/245 (65.31%), Query Frame = 0
Query:    6 SIETFVGFKAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVVDCGSFDRRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGYILASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFMELFCATAPDTTPTRYATW 250
            S+ +F GFKAHEFVAH+GK NCVA+GPRSGQ          A     +RVNVW+IGRASSIWSLTGNSS IESL FDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTV+DCGSFDRRF                               TDVQFSPDG+ILASAA                             XXXXXXXXXXXXXXXXXXXXXX EFMELFC TAPDT PTR  T+
Sbjct:    8 SLGSFAGFKAHEFVAHAGKTNCVAVGPRSGQ--------VLATGGDDKRVNVWRIGRASSIWSLTGNSSGIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVTTGSMDCQV---------------------TDVQFSPDGHILASAAADGQVKLWDLRAGKPMHTFQACSGAVRAIXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTRAITF 223          
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: A0A836CLK5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK5_9STRA)

HSP 1 Score: 152 bits (384), Expect = 7.270e-39
Identity = 84/166 (50.60%), Postives = 97/166 (58.43%), Query Frame = 0
Query:   12 GFKAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVVDCGSFDRRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGYILASAA 177
            GFKAHEFVAHS KVNCVAIGP              A     +RVNVWKIGRA+ IWSL GNSS IE +CFD  EE L SGS+GGAVK +DL+ GKM R+FRGHMSNVT +  G+FD  +                                +VQFSPDG++LAS A
Sbjct:   12 GFKAHEFVAHSTKVNCVAIGPHGA---------VLATGGEDKRVNVWKIGRANHIWSLAGNSSPIECVCFDHAEENLYSGSSGGAVKQYDLTVGKMARNFRGHMSNVTALHSGAFDSAYLATGALDCVVKVWNTATKECVMAFKGHGAEVCEVQFSPDGFLLASGA 168          
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: A0A482STH4_9ARCH (Katanin_con80 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STH4_9ARCH)

HSP 1 Score: 92.0 bits (227), Expect = 1.770e-17
Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 0
Query:   14 KAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVV 121
            +  EFVAHS +VNC+A+G +S Q          A      +VN+W++G  S+IW+L  N S IE LCFD  E  +VSG+  G++K+FDL+ GK+ R+   H  NVT V
Sbjct:   11 RVQEFVAHSTQVNCLALGSKSSQ--------VLATGGEDAKVNIWRVGSVSNIWTLGQNKSPIECLCFDADELCVVSGAMNGSLKVFDLNEGKLARNLGSHQVNVTSV 110          
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: A0A3Q0F503_VIGRR (katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Vigna radiata var. radiata TaxID=3916 RepID=A0A3Q0F503_VIGRR)

HSP 1 Score: 71.2 bits (173), Expect = 2.630e-12
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 0
Query:   12 GFKAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAVKLFDLSAGK 106
            G+K  EFVAHSG VNC+ IG ++ + F                VN+W IG+ +S+ SL G+++ +ES+  D  E  ++SG++ G +KL+DL   K
Sbjct:    5 GYKLQEFVAHSGNVNCLRIGRKASRLFITGGD--------DHNVNLWMIGKTTSLMSLCGHTTTVESVTLDSAEALVLSGASSGVIKLWDLQEAK 91          
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: A0A5N5KUC6_9ROSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5KUC6_9ROSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.210e-10
Identity = 46/135 (34.07%), Postives = 68/135 (50.37%), Query Frame = 0
Query:   14 KAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAVKLFDLSAGK------------------MTRHFRGHMSNVTVVDCGSFDRRF 130
            K  EFVAHS  VNC++IG +      AC    T       +VN+W IG+ +S+ SL G++S +ES+ FD +E  +++G++ GA+KL+DL   K                  + R   GH S  T V+   F   F
Sbjct:    2 KIEEFVAHSTNVNCLSIGKK------ACRMFITGGD--DHKVNLWAIGKPTSLMSLCGHTSPVESVAFDTSEVLVLAGASMGAIKLWDLEEAKSKLIDCIPYLNEVVIISVVVRTLTGHRSGCTAVEFHPFGEFF 128          
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: UPI000CECF9E9 (katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=UPI000CECF9E9)

HSP 1 Score: 67.0 bits (162), Expect = 1.450e-10
Identity = 40/122 (32.79%), Postives = 60/122 (49.18%), Query Frame = 0
Query:   12 GFKAHEFVAHSGKVNCVAIGPRS-------GQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVVDCGSF 126
            G+K  EF+AHS  VNC++IG ++       G D+                          S+ SL G++SA++S+ FD  E  ++ G++ G  KL+DL   KM R F GH SN + V+   F
Sbjct:    5 GYKLQEFLAHSANVNCLSIGKKTSRLLITGGDDY---------------NXXXXXXXXXXSLMSLCGHTSAVDSVAFDSAEVLVLGGASSGVRKLWDLEEAKMVRAFTGHRSNCSAVEFHPF 111          
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: A0A7S0XBV6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBV6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.830e-10
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   14 KAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGS 92
            K  EFVAHS +VNC+ IG +S Q          A      +VN+WKIG +S+IW+L+ N S I+SLCFD  E+ +VSG+
Sbjct:    7 KVQEFVAHSTEVNCLTIGSKSCQ--------VLATGGEDAKVNIWKIGDSSNIWTLSSNKSPIQSLCFDCDEQCVVSGA 77          
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: UPI0010364B0F (katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 n=4 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010364B0F)

HSP 1 Score: 69.7 bits (169), Expect = 5.290e-10
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   12 GFKAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAV 97
            G+K  EF+AHSG VNC+ IG ++ + F        A     Q VN+W IGR +S+ SL G++S +ES+ FD TE  L++G++ G +
Sbjct:    5 GYKLQEFLAHSGSVNCLNIGKKTCRLF--------ATGGDDQNVNIWSIGRPTSLMSLCGHTSPVESVTFDLTEALLLAGASAGVI 82          
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Match: A0A4S4DDG8_CAMSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4DDG8_CAMSI)

HSP 1 Score: 69.7 bits (169), Expect = 7.250e-10
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   12 GFKAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKSTISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAV 97
            G+K  EF+AHSG VNC+ IG ++ + F        A     Q VN+W IGR +S+ SL G++S +ES+ FD TE  L++G++ G +
Sbjct:   87 GYKLQEFLAHSGSVNCLNIGKKTCRLF--------ATGGDDQNVNIWSIGRPTSLMSLCGHTSPVESVTFDLTEALLLAGASAGVI 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig898.16831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ17_ECTSI1.580e-6385.71Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A6H5K3J5_9PHAE2.560e-6261.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CLK5_9STRA7.270e-3950.60WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A482STH4_9ARCH1.770e-1743.52Katanin_con80 domain-containing protein n=1 Tax=ar... [more]
A0A3Q0F503_VIGRR2.630e-1237.89katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A5N5KUC6_9ROSI1.210e-1034.07Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
UPI000CECF9E91.450e-1032.79katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A7S0XBV6_9STRA4.830e-1046.84Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
UPI0010364B0F5.290e-1041.86katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A4S4DDG8_CAMSI7.250e-1041.86Katanin p80 WD40 repeat-containing subunit B1 homo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 131..145
score: 35.3
coord: 173..187
score: 39.85
coord: 88..102
score: 32.59
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 189..228
e-value: 5.1E-6
score: 36.0
coord: 147..186
e-value: 2.5E-10
score: 50.3
coord: 104..144
e-value: 0.013
score: 24.7
coord: 11..59
e-value: 200.0
score: 2.5
coord: 62..101
e-value: 6.4E-5
score: 32.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 106..144
e-value: 2.0E-6
score: 28.4
coord: 66..101
e-value: 4.7E-4
score: 20.9
coord: 190..228
e-value: 0.0032
score: 18.3
coord: 150..186
e-value: 3.0E-8
score: 34.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 196..230
score: 9.239
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 69..110
score: 11.244
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 154..195
score: 18.195
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 111..153
score: 9.706
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..129
e-value: 4.6E-16
score: 60.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 130..250
e-value: 8.6E-34
score: 118.9
NoneNo IPR availablePANTHERPTHR19845KATANIN P80 SUBUNITcoord: 14..249
NoneNo IPR availablePANTHERPTHR19845:SF0KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1coord: 14..249
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 173..187
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 131..145
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 18..237
score: 38.784
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 15..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig898contigH-paniculata_contig898:705..16276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig898.16831.1mRNA_H-paniculata_contig898.16831.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig898 705..16276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig898.16831.1 ID=prot_H-paniculata_contig898.16831.1|Name=mRNA_H-paniculata_contig898.16831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=257bp
MLHYDSIETFVGFKAHEFVAHSGKVNCVAIGPRSGQDFCACVQTTTAKST
ISQRVNVWKIGRASSIWSLTGNSSAIESLCFDPTEEFLVSGSAGGAVKLF
DLSAGKMTRHFRGHMSNVTVVDCGSFDRRFVTTGSMDCQVKLWNVETKEC
AMGFKGHGAEVTDVQFSPDGYILASAAVDGQVKLWDLRAGKPMHTFQACS
GPVRALRFNPQEFLLAVSTSDRTVKLYDIEFMELFCATAPDTTPTRYATW
KFSYHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf