prot_H-paniculata_contig8869.16759.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8869.16759.1
Unique Nameprot_H-paniculata_contig8869.16759.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length336
Homology
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 2.540e-53
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 0
Query:  198 GVPLPPSEPFRAGAAGAYGLRKRPVGGEGDDGEEEARRAAWQVQVQEESKSRVEESHKVEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLFLGLMR 335
            G P   +E  R G   A GLRKRP   +G D EEE+RRAAWQVQVQE+SK+RV+ESHKVEKMIG+LG MFSRFSTMVAAQEEVV+HIEDDVEAAHAFAEEGQAHLAKYYQ+ SGNRGIIIKVF +LI  IW+FLGLMR
Sbjct:  352 GFPPLRTEASRGGGR-ATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 488          
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 7.700e-26
Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 0
Query:  259 MIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLF 330
            MIGELG MFS+FS +VAAQEE V+HIEDDVE AH FA +G AHL++YYQ +SGNRGII+KV  LL FF+W+F
Sbjct:    1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSRYYQTISGNRGIIVKVLILLAFFVWVF 72          
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: A0A7S2XXW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 8.180e-16
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 0
Query:  240 VQVQEESKSRVEESHKVEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLFLGLMR 335
             ++Q  SK RVEE+  +E  I E   MFS+ +TMVA Q E+V  I+DD+E A      G   L +YY ++SGNRG+IIK+F  L+ FI+LF+ L +
Sbjct:   10 AELQTSSKQRVEEARSIEATISEFATMFSKMATMVAQQGELVTRIDDDMELALGNVSAGHTELTRYYSIISGNRGLIIKIFITLMVFIFLFVVLFK 105          
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC)

HSP 1 Score: 79.3 bits (194), Expect = 1.070e-14
Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 0
Query:  243 QEESKSRVEESHKVEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLF 330
            Q ++ SR+ E+  VEK I ELGQ FSR + +VAAQ EVV+ I+DD+EAA    ++G A +  Y +++ GNR +I KVFALL+ FI +F
Sbjct:   25 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEMVNYLRIVKGNRAVIFKVFALLLVFIVVF 112          
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)

HSP 1 Score: 78.6 bits (192), Expect = 1.110e-14
Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = 0
Query:  242 VQEESKSRVEESHKVEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLF 330
            +++ S+ R++ +H +EK IG+LG++FSRFS++VA Q EVV  ++DDVE A    E G A L K  +V+ GNR + +KVFA+LI  I LF
Sbjct:    2 LEQTSRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLKAQEVLRGNRALFLKVFAVLIALIVLF 90          
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: A0A7S3H3X9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3X9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.200e-14
Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 0
Query:  248 SRVEESHKVEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLF 330
            SR E    V+K IGEL QMFS+ + +V AQEE++  I+ D+++     +EGQ HL KY+Q +S NRG+IIKVF +LIFF+  F
Sbjct:  216 SRAEAVQNVQKTIGELAQMFSKMAVLVTAQEEMIQRIDSDLDSTITNVDEGQQHLLKYFQYISSNRGLIIKVFLILIFFVVFF 298          
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: A0A7S1UDN8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDN8_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.970e-13
Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 0
Query:  244 EESKSRVEESHKVEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLFL 331
            E+ ++RV+E+H VEK IGEL  MF + +T+++ Q E ++ I+DD+  A    E+ Q  L +  Q++S NR II+  FALLIFFI+LFL
Sbjct:   55 EDVQTRVKEAHAVEKAIGELQSMFGKMATLISQQNETIVRIDDDMAEAQMEVEDAQGELTQVLQIVSENRQIILITFALLIFFIFLFL 142          
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.100e-12
Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 0
Query:  243 QEESKSRVEESHKVEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLF 330
            Q ++ SR+ E+  VEK I ELGQ FSR + +VAAQ EVV+ I+DD+EAA    ++G   +  Y +++ GNR +I KVFALL+ FI +F
Sbjct:  278 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVVRIDDDMEAALEDVQKGHVEMVNYLRIVKGNRAVIFKVFALLLVFIVVF 365          
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: A0A485LIS1_9STRA (Aste57867_21905 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS1_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 7.030e-12
Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = 0
Query:  210 GAAGAYGLRKRPVGGEGDDGEEEARRAAWQVQVQEES-KSRVEESHKVEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLFL 331
            G   A G+R+RP    G  G   A++   Q  ++  + +SR+ ++  VE MIGE+G M+SR + ++A QEE++  IEDD+  AH+  E G   L KY+  +S NR +I+K+F +L+ FI+LFL
Sbjct:  204 GPDAAAGMRRRPFMN-GATGSSYAQQQQQQNLMRHRTAQSRLNDAQNVEAMIGEIGGMYSRMTGLLANQEEMLGRIEDDMTTAHSNVEGGYEELMKYFSTVSSNRSLILKIFLVLLVFIYLFL 325          
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Match: C5LX88_PERM5 (Syntaxin 5, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LX88_PERM5)

HSP 1 Score: 70.9 bits (172), Expect = 1.590e-11
Identity = 34/75 (45.33%), Postives = 52/75 (69.33%), Query Frame = 0
Query:  256 VEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFALLIFFIWLF 330
            V++ IGELGQMF + S+MV  Q+E+++ I+ DV+       EGQ  L KY+  +SGNR +I+K+FA+L+ F+  F
Sbjct:   45 VQRTIGELGQMFEKVSSMVYEQDEMIMRIDSDVDDTMGHLNEGQNQLLKYFHSISGNRSLILKIFAILVCFVIFF 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8869.16759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE2.540e-5376.81t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835ZFW2_9STRA7.700e-2670.83t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2XXW7_9STRA8.180e-1645.83Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
I2CQ48_NANGC1.070e-1450.00t-SNARE coiled-coil homology domain-containing pro... [more]
F0Y6L6_AURAN1.110e-1448.31t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3H3X9_9STRA3.200e-1450.60Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1UDN8_9STRA2.970e-1346.59Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A4D9CWV4_9STRA3.100e-1248.86t-SNARE coiled-coil homology domain-containing pro... [more]
A0A485LIS1_9STRA7.030e-1239.84Aste57867_21905 protein n=1 Tax=Aphanomyces stella... [more]
C5LX88_PERM51.590e-1145.33Syntaxin 5, putative n=1 Tax=Perkinsus marinus (st... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 238..305
e-value: 4.4E-8
score: 42.9
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 279..330
e-value: 3.9E-7
score: 30.0
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 243..305
score: 11.297
NoneNo IPR availableGENE3D1.20.5.110coord: 234..334
e-value: 2.1E-13
score: 51.8
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 225..331
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 225..331
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..314
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 315..334
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 335..335
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 240..306
NoneNo IPR availableTMHMMTMhelixcoord: 314..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8869contigH-paniculata_contig8869:2451..5438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8869.16759.1mRNA_H-paniculata_contig8869.16759.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8869 1334..6335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8869.16759.1 ID=prot_H-paniculata_contig8869.16759.1|Name=mRNA_H-paniculata_contig8869.16759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=336bp
MAPAAKLDYPLFGNPGGNNKNGLRDRAAARRRASPSPPPPPPPRPPPLST
SPPYDVPPVGNDSGAPASRPSLRAESSAAAGGGGQRSPSYPASAAGLEAA
KAVAGGGYSRGASPQGAAAAPWLAGSSNSGGGGGRGSVGVNNAFSGGGGG
PSGAFGDNGSSGSRGLRGGVGGGTHGALSYSSSSSPYGGAGGDPGGWGVP
LPPSEPFRAGAAGAYGLRKRPVGGEGDDGEEEARRAAWQVQVQEESKSRV
EESHKVEKMIGELGQMFSRFSTMVAAQEEVVLHIEDDVEAAHAFAEEGQA
HLAKYYQVMSGNRGIIIKVFALLIFFIWLFLGLMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom