prot_H-paniculata_contig8867.16758.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8867.16758.1
Unique Nameprot_H-paniculata_contig8867.16758.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
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BLAST of mRNA_H-paniculata_contig8867.16758.1 vs. uniprot
Match: D7G6E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E8_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 2.950e-20
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:    9 QKRAAAAAAREGKSKFGRSIVLRVKEVFDSAHTDGSGYVDEREWRRLTEGTPLGAPADTFLPTER 73
            +K+ AAAAAREG+++F RS ++++KEVFDS   DGSGYVDE EWRRLTE TPL A  DTFL  ER
Sbjct:  189 EKKRAAAAAREGRNRFARSSIMKIKEVFDSIDKDGSGYVDEEEWRRLTEDTPLAASDDTFLFIER 253
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BLAST of mRNA_H-paniculata_contig8867.16758.1 vs. uniprot
Match: A0A6H5JDE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE5_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 6.020e-20
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:    9 QKRAAAAAAREGKSKFGRSIVLRVKEVFDSAHTDGSGYVDEREWRRLTEGTPLGAPADTFLPTER 73
            +K+ AAAAAREG+++F RS ++++KEVFDS   DGSGYVDE EWRRLTE TPL A  DTFL  ER
Sbjct:  240 EKKRAAAAAREGRNRFARSSIMKIKEVFDSVDKDGSGYVDEEEWRRLTEDTPLAASDDTFLFIER 304
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BLAST of mRNA_H-paniculata_contig8867.16758.1 vs. uniprot
Match: C1MST6_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MST6_MICPC)

HSP 1 Score: 47.8 bits (112), Expect = 5.810e-5
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0 
Query:   16 AAREGKSKFGRSIVLRVKEVFDSAHTDGSGYVDEREWRRLTEGTPLG-APADTF 68
            A ++  SKF +S VL++KEVFD A  DGSG +D  E  +  + T LG A AD F
Sbjct:    3 AMKKTSSKFNKSEVLKLKEVFDEADKDGSGEIDTAELAQSLQKTNLGEAAADMF 56
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8867.16758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6E8_ECTSI2.950e-2066.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDE5_9PHAE6.020e-2066.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
C1MST6_MICPC5.810e-548.15Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8867contigH-paniculata_contig8867:8269..9833 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8867.16758.1mRNA_H-paniculata_contig8867.16758.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8867 5889..9833 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8867.16758.1 ID=prot_H-paniculata_contig8867.16758.1|Name=mRNA_H-paniculata_contig8867.16758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
MKIVVHREQKRAAAAAAREGKSKFGRSIVLRVKEVFDSAHTDGSGYVDER
EWRRLTEGTPLGAPADTFLPTER
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