prot_H-paniculata_contig8819.16732.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8819.16732.1
Unique Nameprot_H-paniculata_contig8819.16732.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length940
Homology
BLAST of mRNA_H-paniculata_contig8819.16732.1 vs. uniprot
Match: D7FR27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR27_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 1.860e-70
Identity = 317/981 (32.31%), Postives = 430/981 (43.83%), Query Frame = 0
Query:    2 RWLTRGISALCRQKDSGIHHGGGSGEKTSSWPSGGIRDIRLRGNNITHAGAKELATLLSEDRCAHELRELDLSLNTITNEGFHPLVASLKGCRELIRLDVAGCRLGPGGVKTIARLLVDAPPLLSKINLAPKTEFADRVLSDREGLAVALCEALQQVADALPFAGAVVELGLGFYSRADPAASDVIERTLLEHRERMGVASTEGTAGAGA-RPEAGVAAHKGGGDIGISDREGRTPVSNEKKTRVPSKSGSSSGGSSNSRXXXXXXXXXXXXXXXXXXXPRPTQRGTSGRSRDRQGTPRAFGIERPKAGXXXXXXXXXXXXXSTAERMRRNAGNHSSGTVAASVNATPPSGSGSLSRSSSSTKSSIRGKSSAGRSQKTTPATLAARDREATAAVELASANSGAQPQHRRMHQGEELDSIDGFTPVPSNAMATANGLPMSATSSKRYLTYGGGXXXXXXGSRKMPNHFDDG----RNAGDPFATAATKSTTTAGAAARSSSRTLPRMGSAGQGSNLSAVAGVVSDVIADTAAMDDLTVSPPPVAPSTWQDGSNGASDHSTSMPLEGMPPRPPAFKMRPPE------PHSAGSTRDGHSPKLLRK----------TTSVSSVKGNDEPEIVEGVNALTLMTDEPASRARSNSGETRICSQETAIELSTPSGAGAQQ-MISLEEAGQLLGPIVAKEVAKETRRLEIK---------------------------FQNNLNTALTKVRAELQSIDREGLVARVALEKRVTSGVRRLLEKLXXXXXXXXXXXXXXXXRKRLALEASGGSGETTEANSTHALTAVGATPPRRKAAAPVILPPXXGPVGLGLGSAAADGFWARGEAHEVEELAVGEGDTARSRRGXXXXXXXXVATRDGGASVVPESARPAVEPAAGRRALASGADGGGSSEGEGGVESGAATSEETLMDSCDEEEADMVRRLEAKMAALEGKLIGHEERQRNDYRVA 933
            +WL +GISALCR +        GSG         GIRD+RLRGNNITH GAKELAT+LSE RCA +LRELDLS+NTIT +GF PL  SL+GCREL+RLDVAGCRLGPGGV  +A L+  + P L+ + L PK EFADRVL DR GLAVAL ++LQ++AD+LPFAG+VVE G+G                              G  G G  RP+AG+   K  G  G ++R+                                                                             XXXXXXXXXXXXX         AG   +G     V                           AG+  KTT ATLAARDR        A+ ++ A P HRR+HQGEELDSI+GFT             P     ++  L     XXXXXX        + D     + A  P  +A  +++ + G                     + ++A VVS V+ DTAA+ D  V+PPPVAPSTW   +N      ++   +                     P S G                        +  ++ + + EPE+  G+ +L L +D   S   S+S  T      TAIE+S          ++++E+A ++L P+VA+EV KET+++EI+                           +QN +N+AL  +R+E+++IDREGL+ARVA+EKR+ +G++RLLE++                RKRLALEA+     +  A         G        AA V+       V L   S+A++   A  +++          DT  +R          + T  GG                G  + A+G+    S +GE               ++ D+ EAD+VR LE KMAALEGKL+GHEERQR D R A
Sbjct:  195 QWLCKGISALCRNQQDAA----GSGS--------GIRDLRLRGNNITHTGAKELATILSEGRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLTAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVE-GIG----------------------------KSGARGTGIERPKAGLERQKAAG--GTAERQXXXXXXXXXXXXX-------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGKPETGQPRQPV--------------------------VAGQHHKTTTATLAARDR--------AAVDAHAAP-HRRLHQGEELDSIEGFTEQRQ--------APKLMPPTRELLASXXXXXXXXXXXXXNTGFYGDXXXXXKKAAGPGPSAGLEASASGGV--------------------VESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWDTNSGGPAGSAATGKXXXXXXXXXXXXXXXXXXXMVPSSVGPVSXXXXXXXXXXXXXXXXXXXXASFSTAPESSSEPEVAAGMTSLAL-SDGSRSGLNSSSQGT------TAIEVSXXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQRRVPSSVVCAAAKRVRLALLKHLGAWQNEMNSALRTMRSEMEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLERED--RKRLALEAA-----SVAAXXXXXXXXXGG-------AADVV-------VRLQSPSSASETSAALNKSNRAP-------DTPEAR---------PLVTWSGGD---------------GDFSSAAGSTAASSCDGE-------------YSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQRTDPRAA 942          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8819.16732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR27_ECTSI1.860e-7032.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 905..925
NoneNo IPR availableCOILSCoilCoilcoord: 714..748
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 34..61
e-value: 1.3
score: 16.2
coord: 93..120
e-value: 11.0
score: 9.9
coord: 65..92
e-value: 0.54
score: 19.1
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 38..163
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 39..130
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 68..82
e-value: 0.083
score: 13.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 24..159
e-value: 2.1E-16
score: 61.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8819contigH-paniculata_contig8819:966..7534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8819.16732.1mRNA_H-paniculata_contig8819.16732.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8819 347..9036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8819.16732.1 ID=prot_H-paniculata_contig8819.16732.1|Name=mRNA_H-paniculata_contig8819.16732.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=940bp
MRWLTRGISALCRQKDSGIHHGGGSGEKTSSWPSGGIRDIRLRGNNITHA
GAKELATLLSEDRCAHELRELDLSLNTITNEGFHPLVASLKGCRELIRLD
VAGCRLGPGGVKTIARLLVDAPPLLSKINLAPKTEFADRVLSDREGLAVA
LCEALQQVADALPFAGAVVELGLGFYSRADPAASDVIERTLLEHRERMGV
ASTEGTAGAGARPEAGVAAHKGGGDIGISDREGRTPVSNEKKTRVPSKSG
SSSGGSSNSRTRVNEDSGSASISGRRGETPRPTQRGTSGRSRDRQGTPRA
FGIERPKAGLERAKAGLERSKASTAERMRRNAGNHSSGTVAASVNATPPS
GSGSLSRSSSSTKSSIRGKSSAGRSQKTTPATLAARDREATAAVELASAN
SGAQPQHRRMHQGEELDSIDGFTPVPSNAMATANGLPMSATSSKRYLTYG
GGGGAGGAGSRKMPNHFDDGRNAGDPFATAATKSTTTAGAAARSSSRTLP
RMGSAGQGSNLSAVAGVVSDVIADTAAMDDLTVSPPPVAPSTWQDGSNGA
SDHSTSMPLEGMPPRPPAFKMRPPEPHSAGSTRDGHSPKLLRKTTSVSSV
KGNDEPEIVEGVNALTLMTDEPASRARSNSGETRICSQETAIELSTPSGA
GAQQMISLEEAGQLLGPIVAKEVAKETRRLEIKFQNNLNTALTKVRAELQ
SIDREGLVARVALEKRVTSGVRRLLEKLEKLERRFARMEKEDRERKRLAL
EASGGSGETTEANSTHALTAVGATPPRRKAAAPVILPPPPGPVGLGLGSA
AADGFWARGEAHEVEELAVGEGDTARSRRGGGGGAAADVATRDGGASVVP
ESARPAVEPAAGRRALASGADGGGSSEGEGGVESGAATSEETLMDSCDEE
EADMVRRLEAKMAALEGKLIGHEERQRNDYRVAVEDETF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf