prot_H-paniculata_contig8817.16729.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8817.16729.1
Unique Nameprot_H-paniculata_contig8817.16729.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: A0A6H5KZK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK4_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.600e-16
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    3 RTASGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASMAFLKR 55
            RTA+GL FTTGITLFSGSIY   +  DK+AS  APAGGI +ILGWA+MA LKR
Sbjct:   61 RTAAGLFFTTGITLFSGSIYYACLKEDKKASKVAPAGGICMILGWATMAILKR 113          
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: A0A835YJ16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ16_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.640e-12
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    3 RTASGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASMAFLKR 55
            RTA+G+LFT+GI LFSGSIY Y +T + + S AAP GG+A I GW S+A LKR
Sbjct:   62 RTAAGVLFTSGIILFSGSIYTYILTDNIKMSGAAPLGGMAFIAGWLSLALLKR 114          
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: A0A7S4IW56_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IW56_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.170e-10
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    4 TASGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASMAFLKR 55
            TA+G   TTGI LF GS Y  G+T D+    AAPAGG++LILGW S+A L++
Sbjct:   67 TAAGAFLTTGIGLFCGSCYAVGVTEDRAYGKAAPAGGVSLILGWVSLALLRK 118          
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: UPI0003642BF6 (DUF423 domain-containing protein n=1 Tax=Thiofilum flexile TaxID=125627 RepID=UPI0003642BF6)

HSP 1 Score: 54.7 bits (130), Expect = 5.090e-8
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    6 SGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASMAF 52
            +GLLFT GI LFSGS+Y+Y ++G K      P GGIA I GWA M +
Sbjct:   76 AGLLFTIGIILFSGSLYLYALSGVKALGMITPIGGIAFIAGWAVMLY 122          
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: A0A7C2A565_9PROT (DUF423 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C2A565_9PROT)

HSP 1 Score: 54.7 bits (130), Expect = 5.720e-8
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    6 SGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASMAFL 53
            +G+ FT GI LFSGS+Y++ +TG   A  A P GGIAL+ GWA++ +L
Sbjct:   78 AGVSFTVGIILFSGSLYIFAVTGAMPAEGATPVGGIALLTGWAALIWL 125          
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: A0A8J8CMI9_9CYAN (DUF423 domain-containing protein n=1 Tax=Myxacorys almedinensis A TaxID=2690445 RepID=A0A8J8CMI9_9CYAN)

HSP 1 Score: 53.9 bits (128), Expect = 9.570e-8
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    1 MTRTASGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASMA 51
            M  TASG+ F  GI LFSGS+Y   + G ++    AP GGIALI+GW S+A
Sbjct:   68 MLLTASGISFVVGIGLFSGSLYALSLLGIRQLGAVAPLGGIALIVGWISLA 118          
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: A0A1Y1QEH2_9GAMM (Uncharacterized protein n=2 Tax=Thiothrix TaxID=1030 RepID=A0A1Y1QEH2_9GAMM)

HSP 1 Score: 53.1 bits (126), Expect = 2.140e-7
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    6 SGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASMAFLKR 55
            +G  F  GI LFSGS+Y+Y +TG+K  +   P GG++ I+GWA +AF  R
Sbjct:   73 AGYAFLLGIVLFSGSLYLYVLTGNKGFAMVTPLGGLSFIVGWALLAFSAR 122          
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: A0A2S6U7G2_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6U7G2_9PROT)

HSP 1 Score: 52.8 bits (125), Expect = 2.860e-7
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    6 SGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASMAF 52
            +G LF  GI LFSG++Y  GI+G+     AAP GG+AL+ GWA++AF
Sbjct:   75 AGGLFLAGIVLFSGTMYSLGISGELLVPGAAPVGGVALMAGWAALAF 121          
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: A0A1B7VY70_APHFL (Uncharacterized protein n=4 Tax=Nostocales TaxID=1161 RepID=A0A1B7VY70_APHFL)

HSP 1 Score: 51.6 bits (122), Expect = 7.870e-7
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    6 SGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASMAF 52
            SG LF  G+ +FSGS+Y   +TG K     AP GG+AL++GW ++AF
Sbjct:   73 SGWLFIIGVVIFSGSLYTLSLTGIKSWGAVAPLGGLALMIGWGTLAF 119          
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Match: A0A1H6FE85_9GAMM (Uncharacterized protein n=1 Tax=Thiotrichales bacterium HS_08 TaxID=1899563 RepID=A0A1H6FE85_9GAMM)

HSP 1 Score: 51.6 bits (122), Expect = 9.940e-7
Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0
Query:    5 ASGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASM 50
            A+G L TTGI LFSGS+Y+  ITG K      P GGI  ILGW ++
Sbjct:   82 AAGWLLTTGIVLFSGSLYLLSITGIKNFGWITPVGGICFILGWMAL 127          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8817.16729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZK4_9PHAE2.600e-1671.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJ16_9STRA1.640e-1262.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4IW56_9STRA1.170e-1055.77Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
UPI0003642BF65.090e-855.32DUF423 domain-containing protein n=1 Tax=Thiofilum... [more]
A0A7C2A565_9PROT5.720e-852.08DUF423 domain-containing protein n=1 Tax=Alphaprot... [more]
A0A8J8CMI9_9CYAN9.570e-852.94DUF423 domain-containing protein n=1 Tax=Myxacorys... [more]
A0A1Y1QEH2_9GAMM2.140e-748.00Uncharacterized protein n=2 Tax=Thiothrix TaxID=10... [more]
A0A2S6U7G2_9PROT2.860e-753.19Uncharacterized protein n=3 Tax=Alphaproteobacteri... [more]
A0A1B7VY70_APHFL7.870e-748.94Uncharacterized protein n=4 Tax=Nostocales TaxID=1... [more]
A0A1H6FE85_9GAMM9.940e-754.35Uncharacterized protein n=1 Tax=Thiotrichales bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006696Protein of unknown function DUF423PFAMPF04241DUF423coord: 4..40
e-value: 3.7E-8
score: 33.5
IPR006696Protein of unknown function DUF423PANTHERPTHR43461FAMILY NOT NAMEDcoord: 6..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 36..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8817contigH-paniculata_contig8817:5220..6239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8817.16729.1mRNA_H-paniculata_contig8817.16729.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8817 5094..7018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8817.16729.1 ID=prot_H-paniculata_contig8817.16729.1|Name=mRNA_H-paniculata_contig8817.16729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
MTRTASGLLFTTGITLFSGSIYMYGITGDKRASTAAPAGGIALILGWASM
AFLKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006696DUF423