prot_H-paniculata_contig875.16674.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig875.16674.1
Unique Nameprot_H-paniculata_contig875.16674.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length280
Homology
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BLAST of mRNA_H-paniculata_contig875.16674.1 vs. uniprot
Match: A0A6A3EZF8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3EZF8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.070e-8
Identity = 51/191 (26.70%), Postives = 84/191 (43.98%), Query Frame = 0 
Query:   85 TSRIYDFGWKVHRMVDGEKRMGFTCLATDFCRERSAGGAFISIGVGNFTNATDHLRRKHGCGKSPKTALAEGTVVFLERPVFQARQLALYKSNKMRFLGLCWVRTNVIGQLAPLSNGESFQQRVLWSLMCHPEFPVTRVHRKAVKHKVIELYNATTPVINERLCERVGGDCVAHASLDLWTDKGSTLKYDG 275
            TS I+D+G ++    D + ++GFTC+A +FCR        + +  G  + A  HLR  H   +SPKT          E  + + R   ++  N  R L +      +I    PL   E  + R++ +L+   E  V  +  + +   +IELY++T   I E   E            D WT K ++ K+ G
Sbjct:   31 TSYIFDWGVRIEYDEDNKTKVGFTCMADEFCRSADNAANLLLLSKGRTSAAVKHLRLVHHL-ESPKTKKEGKQKRKCEVEIERLRSSTMFARNPAR-LNVLLETLRIINYNLPLCICEYEESRLVEALVKKEEMKVI-ITAERIGETIIELYSSTRKEITELFEENKEVYPNFRMMADFWTCKTTSKKFLG 218
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig875.16674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6A3EZF8_9STRA1.070e-826.70Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig875contigH-paniculata_contig875:24592..27937 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig875.16674.1mRNA_H-paniculata_contig875.16674.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig875 23175..28911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig875.16674.1 ID=prot_H-paniculata_contig875.16674.1|Name=mRNA_H-paniculata_contig875.16674.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp
MAACSTPAQGLQARPSQAESIDSGVSNTPEVDGHSGSQQPFKRPKTDHVM
QIEDPADDKEVIALYLKRYVPVDGCHMLAVPARATSRIYDFGWKVHRMVD
GEKRMGFTCLATDFCRERSAGGAFISIGVGNFTNATDHLRRKHGCGKSPK
TALAEGTVVFLERPVFQARQLALYKSNKMRFLGLCWVRTNVIGQLAPLSN
GESFQQRVLWSLMCHPEFPVTRVHRKAVKHKVIELYNATTPVINERLCER
VGGDCVAHASLDLWTDKGSTLKYDGQDTT*
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