prot_H-paniculata_contig8728.16656.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8728.16656.1
Unique Nameprot_H-paniculata_contig8728.16656.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length758
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8728.16656.1 vs. uniprot
Match: A0A6H5KZH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH1_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.060e-75
Identity = 135/212 (63.68%), Postives = 158/212 (74.53%), Query Frame = 0 
Query:  533 KEEEPKLPAKPALIALKDGHGVAVEHLTMLIGLVEEMTSKWERHLETFGEGSFTDEMLGREGTKSAGAVRSPKLVGPPLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRANETLDGAWSRMDLLYESDTEDLSIDPTMLKKGDTLLKKGKWGKSRLYPKRIKEQQERDDERGRMPNRRAPRLLSGSVELKPEPD 744
            K  E +   K  L+ALK GHGVAV+HL ML+ LVEEMT KWER L+  GEG + D ML REGT++  A+RS  L GP LPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRA ETL+GAW+R DLLY+SDTE LS++P  + K DT  K  +WG+SR  P   +E    +  R   P RRAP L+SGS++L+  PD
Sbjct:  287 KTHEGQAGNKQELVALKAGHGVAVDHLNMLVSLVEEMTHKWERQLDDGGEGGWDDGMLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISKEDTTSKIPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSPD 498
[Close]
BLAST of mRNA_H-paniculata_contig8728.16656.1 vs. uniprot
Match: A0A835YK37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK37_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.330e-12
Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 0 
Query:  616 IDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRANETLDGAWSRMDLLYESDTEDLSIDPTMLKKGD 693
            +DW  +A  L ++HS+ W+P+ CQGLWKF+AY D  AA+   P  N         ++LL ESD EDL IDP +L K D
Sbjct:  100 LDWSAIAQQLQQKHSLKWTPRYCQGLWKFLAYADATAAVGVRPHDN---------VNLLEESDEEDLEIDPRLLTKRD 168
[Close]
BLAST of mRNA_H-paniculata_contig8728.16656.1 vs. uniprot
Match: D7FLC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC1_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 4.530e-6
Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 0 
Query:  561 MLIGLVEEMTSKWERHLETFGEGSFTDEMLGREGTKSAGAV 601
            ML+GLVEEMT KWER L+  GEG + D+ML REGT   G V
Sbjct:    1 MLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGTGGDGNV 41
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8728.16656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZH1_9PHAE1.060e-7563.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YK37_9STRA5.330e-1246.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FLC1_ECTSI4.530e-663.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 467..494
NoneNo IPR availableCOILSCoilCoilcoord: 385..433

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8728contigH-paniculata_contig8728:3896..9780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8728.16656.1mRNA_H-paniculata_contig8728.16656.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8728 3462..9780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8728.16656.1 ID=prot_H-paniculata_contig8728.16656.1|Name=mRNA_H-paniculata_contig8728.16656.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=758bp
MSLQQLLSGVGEKSQRDSGTSGSSAQPRSSSPRRHQFSIAMPQQQQQQQQ
APQQHQQQRKRPRSPQQSGLAYAATAGSNAAGMTTGSLGESNSSSSSSSS
SRHPFQYRPRRDEAEVAGVAEALHAWRHQEDSGSSSNNPHHYHCHNNDRG
SRDKNNNANSNSNAGNHPQHPVQNGTGIGSPGTAAAAATEHSVLKPNQGR
FFGPPAGAAERRPHNGGGGKHMGRPAAGGGGSLGSVQGGRQGGDSGGGSD
PAWRGDCDEDWERLYQPQIRNLQQQQQRQQQQQQQQPAQRLDYEQQRTHH
SREDQQQRGQGQHKRGGSSSSSGNSGSSPRQGVSAQHRHRPESPTAVEQL
PPPQHTAAADGIAATGDAADKDNNDKSAKPPLTEKEKLQRRRRKEQRLRK
KLKQQQEKQLQQQEHEEEEKQQQQQQKQRQRQNQPSQLPQAQLQSQPATP
APPPKKRAKHKRDQDKRNATQQMRDAARQRYDRLEAAERDREQRLRGNAA
SATTAGEASPGPENEQMANNVNGHGGQRVVPHKEEEPKLPAKPALIALKD
GHGVAVEHLTMLIGLVEEMTSKWERHLETFGEGSFTDEMLGREGTKSAGA
VRSPKLVGPPLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDV
GAAMNALPRANETLDGAWSRMDLLYESDTEDLSIDPTMLKKGDTLLKKGK
WGKSRLYPKRIKEQQERDDERGRMPNRRAPRLLSGSVELKPEPDTLAAQR
ASVISANQ
back to top