prot_H-paniculata_contig871.16645.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig871.16645.1
Unique Nameprot_H-paniculata_contig871.16645.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length417
Homology
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BLAST of mRNA_H-paniculata_contig871.16645.1 vs. uniprot
Match: A0A6H5L446_9PHAE (UDENN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L446_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 3.970e-10
Identity = 37/63 (58.73%), Postives = 42/63 (66.67%), Query Frame = 0 
Query:  353 WEGLKLKHPLTRDEKEQTFMEFAVVGVGEEVLSGARPLQNWGQDTEVISRFPSADRDVDAGGG 415
            WEGL L  PLT DEK  TFMEFAVVGV    LSG +PL+ WGQ  EV+S FP  + D  +G G
Sbjct:   29 WEGLTLTPPLTGDEKNLTFMEFAVVGVSPSTLSGTQPLEPWGQAPEVLSGFPVTEGDDASGRG 91
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig871.16645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L446_9PHAE3.970e-1058.73UDENN domain-containing protein n=2 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig871contigH-paniculata_contig871:2161..5691 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig871.16645.1mRNA_H-paniculata_contig871.16645.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig871 2161..5943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig871.16645.1 ID=prot_H-paniculata_contig871.16645.1|Name=mRNA_H-paniculata_contig871.16645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=417bp
MASGTMASGEPGLQGQQHELSSGLSNEEAGLYMDGLTQTCAALRRRIAEL
ESDNTLLRRANKASTTAAAHPAQACSTLLRATTVSGASSTLPATAAAAAA
PPHQQGKTRRRNSVSVRGKNSDDVNDNANKRGSVLPTVGVTAGDQASSAH
GIGIDTLDSEEGEDDEERMGSGRLHAVGRRYNPAVPVGHDKQQQHNHQHQ
RNSGPITRRSGSVLPSSKLDYDDKMSLLSPSAAGSTDDGDGFVLGRDGLG
VKSREAGCEDVDEWASDDSNGSPEGVVSSPKGRNSRGSLFARIEDLAATR
RLSAVPNRKRYSVGVSRYSLPPSMSPNISPTKSEERYDARSNFLQQYRVG
GVWEGLKLKHPLTRDEKEQTFMEFAVVGVGEEVLSGARPLQNWGQDTEVI
SRFPSADRDVDAGGGDG
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