prot_H-paniculata_contig8682.16623.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8682.16623.1
Unique Nameprot_H-paniculata_contig8682.16623.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length603
Homology
BLAST of mRNA_H-paniculata_contig8682.16623.1 vs. uniprot
Match: D8LDR3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR3_ECTSI)

HSP 1 Score: 580 bits (1495), Expect = 1.510e-199
Identity = 324/603 (53.73%), Postives = 394/603 (65.34%), Query Frame = 0
Query:   27 PGANAEQVLVAQLIDDIVDSDTVVGGDCSNGCSREVHATAFVAGTPQTPTCRLQTVTPFDSAVTPPGLLRASVYCEDVTGALIQQGTGPCIFDVCVDFRWTAGEGDEEGQLDYEVVIERKKKPRAAHTVYIDLSVAIDPTELNVKVDSCESNDECVVKKCTAPTSYMAKIVLTDSYGDGWVGGIPGYYNLWTLEQVGIDIPVSRGTLADNHDSSEVRECLEDGKYVFSTSATSAFSADMGWNICDQFGFAGEGLEFTVSGGQCTG--FKKIERPTAEETSDADFGYCVLPAPVDEQDTRTSTCTTLSSGLKIDGVAMYYDDRCNSADYSGCGARSIDGCRLCFVDKELWLRRFPTSRVPDWPMCPCCVASVLGVDCATADSGGGTDRGVIIGVSVAIVGVIAIACCLSCAFGTTILRFFRRMKKRKNGPSLDDMDMDIN-GAAAFPDSPSNGGTIGHNHT--------GHRNRVHSGHFPIPRFDSIRGRFDSGIFASNNTGGYTSXXXXXXXXXXXVA---NGDVKKDSSNRT--VPTAETTPSGTAKG----------SPNAPRSTVLDDRFVQKGFTSSDVGRPSSGAITAASATAGGGG 603
            P   AEQVLVA L+DDI  +D V  G C++GC R   A A V GTP    C LQTV+PFDS+   PGLLRA +YCED +G LI+QGT PC+FDVCVDF W++G+     +L YE                                     N  C V+ C  P +Y A I +TD YGDGWVGG+ GYYN W L  +  D   S+GTLADNH+S+ ++ECL DG+Y+F+T+ATSAF+ DMGW ICD +G AGEGL+FTV  G C G   + I R TAEETSDA   YCVLPAP  + D RTSTCT LSSG+KIDGV ++YDDRCNSADYSGC ARSI  CRLCF DK+LWL RFP+SRVPDW +CPCCVA  LG+DCA+   GGGTD GVIIGVSV I GVIAIACCLSCAFG TI+RF RRM+K+K+    D +D+D + G +AFP+SP  GG  G  +T        G+R+R  SGHFPIPRFDSIRGRFDSGIFASN  GG   XXX             +G+++K S+ +     TA++TPSG              + NAPRSTVLD R V +G+T++D+ RP+S   + A+  AGGGG
Sbjct:   18 PRGRAEQVLVASLVDDITYTDIVPSGTCADGCVRYEQAVAHVTGTPDQLDCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEF------------------------------------NGTCEVQTCEEPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDVDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWLSRFPSSRVPDWELCPCCVADTLGIDCASG-GGGGTDEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAE--DQLDLDGHPGTSAFPESPG-GGMGGSGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVGGGXXXXXXGVGARAHVGGGGPSGELEKISAEQANVSTTAQSTPSGANXXXXXXXXXXXKAGNAPRSTVLDGRLVAQGYTTTDMERPTSSGPSRAATAAGGGG 580          
BLAST of mRNA_H-paniculata_contig8682.16623.1 vs. uniprot
Match: A0A6H5L5M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M6_9PHAE)

HSP 1 Score: 570 bits (1468), Expect = 1.400e-195
Identity = 276/452 (61.06%), Postives = 334/452 (73.89%), Query Frame = 0
Query:   27 PGANAEQVLVAQLIDDIVDSDTVVGGDCSNGCSREVHATAFVAGTPQTPTCRLQTVTPFDSAVTPPGLLRASVYCEDVTGALIQQGTGPCIFDVCVDFRWTAGEGDEEGQLDYEVVIERKKKPRAAHTVYIDLSVAIDPTELNVKVDSCESNDECVVKKCTAPTSYMAKIVLTDSYGDGWVGGIPGYYNLWTLEQVGIDIPVSRGTLADNHDSSEVRECLEDGKYVFSTSATSAFSADMGWNICDQFGFAGEGLEFTVSGGQCTG--FKKIERPTAEETSDADFGYCVLPAPVDEQDTRTSTCTTLSSGLKIDGVAMYYDDRCNSADYSGCGARSIDGCRLCFVDKELWLRRFPTSRVPDWPMCPCCVASVLGVDCATADSGGGTDRGVIIGVSVAIVGVIAIACCLSCAFGTTILRFFRRMKKRKNGPSLDDMDMD---INGAAAFPDSPS 473
            P A AEQ+LVA L+DDI  +D V  G C++GC R   A A V GTP    C LQTV+PFDS+   PGLLRA +YCED +G LI+QGT PC+FDVCVDF W++G+     +L YEV +ER  KP A HT+Y+DLSVAIDPT  N   DSC+ N  C V+ C AP +Y A I +TD YGDGWVGG+ GYYN W L  +  D   S+GTLADNH+S+ ++ECL DG+Y+F+T+ATSAF+ DMGW ICD +G AGEGL+FTV  G C G   + I R TAEETSDA   YCVLPAP  ++D RTSTCT LSSG+KIDGV ++YDDRCNSADYSGC ARSI  CRLCF DK+LW+ RFP SRVPDW +CPCCVA  LG+DCA+   GGGTD GVIIG+SV I GVIAIACCLSCAFG TI+RFFRR + ++    LD+ D+D   + G +AFP+SP+
Sbjct:  126 PRARAEQILVASLVDDITYADIVPSGTCADGCVRYEQAVAHVTGTPDQLDCDLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEVRVERDSKPSAPHTIYVDLSVAIDPTSTNTNADSCQYNGTCEVQTCEAPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDEDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASG-GGGGTDDGVIIGISVGIAGVIAIACCLSCAFGPTIVRFFRRFQNKR----LDEEDLDMAGVLGTSAFPESPT 572          
BLAST of mRNA_H-paniculata_contig8682.16623.1 vs. uniprot
Match: A0A6H5L443_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L443_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 4.380e-23
Identity = 80/166 (48.19%), Postives = 105/166 (63.25%), Query Frame = 0
Query:  446 MKKRKNGPSLDDMDMDIN-GAAAFPDSPSNGGTI-GHNHT-GHRNRVHSGHFPIPRFDSIRGRFDSGIFASNNTGGYTSXXXXXXXXXXXVANGDVKKDSSNRT--VPTAETTPSGTAKGSP-----------NAPRSTVLDDRFVQKGFTSSDVGRPSSGAITAA 595
            M+K+K+    D +D+D + G +AFPDSP  G T+ G   T G+R+R  SGHFPIPRFDSIRGRFDSGIFASN  GG   XX           +G+++K S+ +     TA++TPSG A GS            NAPRSTVLD R V KG+T++D+GRP+S + + A
Sbjct:    1 MRKKKHAE--DQLDLDGHPGTSAFPDSPGGGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVAGGXXXXXVAGAHVGGGGPSGELEKISAEQANVSTTAQSTPSG-ANGSGVGTGGGGRKAGNAPRSTVLDGRLVAKGYTTTDMGRPTSSSASRA 163          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8682.16623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDR3_ECTSI1.510e-19953.73Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L5M6_9PHAE1.400e-19561.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L443_9PHAE4.380e-2348.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..412
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 413..440
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 441..603
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.539
NoneNo IPR availableTMHMMTMhelixcoord: 421..443
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..31
score: 8.085

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8682contigH-paniculata_contig8682:1015..6498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8682.16623.1mRNA_H-paniculata_contig8682.16623.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8682 1015..7210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8682.16623.1 ID=prot_H-paniculata_contig8682.16623.1|Name=mRNA_H-paniculata_contig8682.16623.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=603bp
MAGFRRQVFAVVGAAAALGLLGGSNNPGANAEQVLVAQLIDDIVDSDTVV
GGDCSNGCSREVHATAFVAGTPQTPTCRLQTVTPFDSAVTPPGLLRASVY
CEDVTGALIQQGTGPCIFDVCVDFRWTAGEGDEEGQLDYEVVIERKKKPR
AAHTVYIDLSVAIDPTELNVKVDSCESNDECVVKKCTAPTSYMAKIVLTD
SYGDGWVGGIPGYYNLWTLEQVGIDIPVSRGTLADNHDSSEVRECLEDGK
YVFSTSATSAFSADMGWNICDQFGFAGEGLEFTVSGGQCTGFKKIERPTA
EETSDADFGYCVLPAPVDEQDTRTSTCTTLSSGLKIDGVAMYYDDRCNSA
DYSGCGARSIDGCRLCFVDKELWLRRFPTSRVPDWPMCPCCVASVLGVDC
ATADSGGGTDRGVIIGVSVAIVGVIAIACCLSCAFGTTILRFFRRMKKRK
NGPSLDDMDMDINGAAAFPDSPSNGGTIGHNHTGHRNRVHSGHFPIPRFD
SIRGRFDSGIFASNNTGGYTSNAAAAAGGGAVVANGDVKKDSSNRTVPTA
ETTPSGTAKGSPNAPRSTVLDDRFVQKGFTSSDVGRPSSGAITAASATAG
GGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal