prot_H-paniculata_contig8681.16621.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8681.16621.1
Unique Nameprot_H-paniculata_contig8681.16621.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length107
Homology
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BLAST of mRNA_H-paniculata_contig8681.16621.1 vs. uniprot
Match: A0A6H5KCZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ8_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.380e-19
Identity = 53/109 (48.62%), Postives = 63/109 (57.80%), Query Frame = 0 
Query:    1 RYGYPLHERGGLGTMDERA--CNGGNVLFAPMIKGLPKFYQTRPRRTV--DRLGGGRGELCTSTTNKEQGDLLYERSTRWLAKADNDRACKLAMREEQEMDACTFQPNV 105
            R+GYPLHER  LG+    A    G    ++PMIKGLP FY++RPRR    D   G R           +   LY+R+T W AKA   RA KLA REEQE+  CTFQPNV
Sbjct:  186 RFGYPLHERECLGSYGAGAGLSGGRGPRYSPMIKGLPDFYESRPRRQSRDDESLGRRTHGNNREAQAGRSASLYQRTTEWQAKASEVRARKLAQREEQELKDCTFQPNV 294
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BLAST of mRNA_H-paniculata_contig8681.16621.1 vs. uniprot
Match: D7G313_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G313_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.100e-18
Identity = 52/109 (47.71%), Postives = 63/109 (57.80%), Query Frame = 0 
Query:    1 RYGYPLHERGGLGTMDERA--CNGGNVLFAPMIKGLPKFYQTRPRRTV--DRLGGGRGELCTSTTNKEQGDLLYERSTRWLAKADNDRACKLAMREEQEMDACTFQPNV 105
            R+GYPLHER  LG+    A    G    ++PMIKGLP FY++RP+R    D   G R           +   LY+R+T W AKA   RA KLA REEQE+  CTFQPNV
Sbjct:  184 RFGYPLHERECLGSYGAGAGLSGGRGPRYSPMIKGLPDFYESRPKRQSRDDESLGRRTHGNNREAQACRSASLYQRTTEWRAKASEVRARKLAQREEQELRDCTFQPNV 292
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8681.16621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCZ8_9PHAE1.380e-1948.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G313_ECTSI1.100e-1847.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8681contigH-paniculata_contig8681:2498..3418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8681.16621.1mRNA_H-paniculata_contig8681.16621.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8681 2498..3418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8681.16621.1 ID=prot_H-paniculata_contig8681.16621.1|Name=mRNA_H-paniculata_contig8681.16621.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
RYGYPLHERGGLGTMDERACNGGNVLFAPMIKGLPKFYQTRPRRTVDRLG
GGRGELCTSTTNKEQGDLLYERSTRWLAKADNDRACKLAMREEQEMDACT
FQPNVRR
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