prot_H-paniculata_contig8660.16610.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8660.16610.1
Unique Nameprot_H-paniculata_contig8660.16610.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length580
Homology
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BLAST of mRNA_H-paniculata_contig8660.16610.1 vs. uniprot
Match: D7G3M1_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3M1_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.680e-16
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 0 
Query:  171 ELLRARDAWRDAEGELARSQAERDELRMALRSVQEQAKEQRRRDRKVHQELGKNKSLAESKARALQADRDRLRQALSRKDAEAAALRAELERKQ 264
            EL RAR+AWR AEGEL RSQ ERDELR  L++VQEQA E+RR DRK  +EL K K+ AE +AR L+ADRDRLR+ LS+ D + A LR +L++ Q
Sbjct: 1211 ELKRAREAWRGAEGELERSQLERDELRAILQAVQEQATERRRADRKEKRELDKEKAKAEYRARDLEADRDRLRRMLSKSDEQVADLRGQLQKAQ 1304
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BLAST of mRNA_H-paniculata_contig8660.16610.1 vs. uniprot
Match: A0A6H5JX98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX98_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.190e-10
Identity = 55/105 (52.38%), Postives = 64/105 (60.95%), Query Frame = 0 
Query:  171 ELLRARDAWRDAEGELARSQAERDELRMAL-----------RSVQEQAKEQRRRDRKVHQELGKNKSLAESKARALQADRDRLRQALSRKDAEAAALRAELERKQ 264
            EL RAR+AWR AEGEL RSQ ERDELR  L           R VQEQA E+RR DRK  +EL K           L+ADRDRLR+ LS+ D E A LR +L++ Q
Sbjct: 1055 ELKRAREAWRGAEGELERSQQERDELRAILQAVSAVGEAAERPVQEQASERRRADRKEKRELDKXXXXXXXXXXELEADRDRLRRMLSKSDEEVADLRGQLQKAQ 1159
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8660.16610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3M1_ECTSI2.680e-1661.70Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JX98_9PHAE1.190e-1052.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 466..486
NoneNo IPR availableCOILSCoilCoilcoord: 186..213
NoneNo IPR availableCOILSCoilCoilcoord: 225..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8660contigH-paniculata_contig8660:5438..9681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8660.16610.1mRNA_H-paniculata_contig8660.16610.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8660 5437..9681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8660.16610.1 ID=prot_H-paniculata_contig8660.16610.1|Name=mRNA_H-paniculata_contig8660.16610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=580bp
GRGVHIDSSAPKADWTFAHNELLRGQQEEAETTENDHARHVNSTRRTDAL
VVDSVKLDVDRSPFTPSSACSSGLLLSVVTGSESSVGVDGPSEQVHARTI
KLPLRAQDLVLTEVYKPVAADLSDPLGPAEVGRNIDGAVGGDMKENGGRV
ATQKIQLEEKKETEETEVYGELLRARDAWRDAEGELARSQAERDELRMAL
RSVQEQAKEQRRRDRKVHQELGKNKSLAESKARALQADRDRLRQALSRKD
AEAAALRAELERKQQQAHNAHERVIVSRNPSSRTPSSSLSPPRLADFKPQ
ALLVRPLWLPSATPIPISTNQNPTNLLIGMDTSTVDEQRVKDDRAVGQNI
SIRETYVSPSESNEMYEYSTSHSVDDQTHSEGGGEPYKGRETCVGKACTP
REGHRPKIGGGREASELLPKKYDDSARVITATDLFEDQGERGEDVCSDQG
NLRHNSQSHGSTETFLRESRAELQTARLLLDSSEEKSRIRSINALGINDK
RCSRATLPFGPSDIRDSETNSSEHVGALTSSCEGKAGHCDSGRLYGTAVL
SRLSLVVDGGLARQGDDQAQEQPETGVRVG
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