prot_H-paniculata_contig864.16601.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig864.16601.1
Unique Nameprot_H-paniculata_contig864.16601.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length686
Homology
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BLAST of mRNA_H-paniculata_contig864.16601.1 vs. uniprot
Match: A0A6H5KU66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU66_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.460e-16
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 0 
Query:  580 AEAAEAEAKQLRTCRIFCEACAKDGVVEFSASKGMRGGGDSWQGLMTAVAAEYAQEVNPGEILGLDAVVVSDLPGRQGQ 658
            AE A  EA++LRT R++CEAC  DGV EF A   MRGGG SW+GL+TAV AEY  E+  G ++G++AVVVSD+PG  G+
Sbjct:  458 AEVAAMEAERLRTSRVYCEACPDDGVTEFLADGEMRGGGPSWKGLVTAVVAEYVHELPEGALVGMEAVVVSDVPGNTGR 536
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig864.16601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KU66_9PHAE1.460e-1658.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 12..89
e-value: 2.9E-6
score: 28.8
IPR019539Galactokinase galactose-binding domainPFAMPF10509GalKase_gal_bdgcoord: 36..81
e-value: 3.3E-5
score: 23.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig864contigH-paniculata_contig864:19465..27537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig864.16601.1mRNA_H-paniculata_contig864.16601.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig864 19463..27537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig864.16601.1 ID=prot_H-paniculata_contig864.16601.1|Name=mRNA_H-paniculata_contig864.16601.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=686bp
NVGSTVLISQQMCNELMEDSSDDRLDALIDRARAIFERKYGESKECFAAF
SPAKVNMMGDFVEGSGGLVLQVTLDRWVVVFGRGRSLPEYPPPGRGTGDD
AGEGVGSEYGNGHGHVGSGRSASGVDKVESQGGHQGEGDGESEDGAVVLN
PVPKTSRRDRGKGNNQTSNAGKTLDTIMQQLVFGKKNKRRNTIAPTGSLV
TSPAGVAQTTSPLRSGSRRGVSGGGGGGDTQRKMSWSSTPSTSHHDSSAS
GHGSSSRFSNVLIEHHFNNGDATGGGGGSSGSGVSHKKNIQDGGFNVTPI
QIHHHHHHHHEPSSAVGLRERDFHGSVDSGSTTTEEAFPNDSGSVFNSSS
SVGGGGRGVGGESGGDGGRGASAGANSGAKTNGLVSGGNGDRKRSVSPVP
SRIGSGGGSSSSRNGGAACQATSSGQLSGTSARRRGLSTDADVEGREEED
DDDDDEDDDRHEEDRGSEYEELSNHGPLADEVGEVTAAAAAAVAGDLLRD
GDEEAENSDDNDDDDDAEYFPARSNDLQDTVYASTSTNCGGGGEPSPARY
MKLPPSEPEIKSPGSGGGRDLPAAVDTAEAEAAEAEAKQLRTCRIFCEAC
AKDGVVEFSASKGMRGGGDSWQGLMTAVAAEYAQEVNPGEILGLDAVVVS
DLPGRQGQIVGAGTGVEAAVGMKGRPVSQEGVGHGW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR019539GalKase_gal-bd