prot_H-paniculata_contig8636.16595.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8636.16595.1
Unique Nameprot_H-paniculata_contig8636.16595.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
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BLAST of mRNA_H-paniculata_contig8636.16595.1 vs. uniprot
Match: D7FSS9_ECTSI (UDENN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSS9_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 2.300e-36
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0 
Query:    1 MSSSRGKPRPKAYLSIGEYLRKAGAFKTVNVYYNDIISTHPSVELSDNGDDEAVDEVAQGMIDAAQHGHVETLRFLAAKAQTG 83
            M + RG PRPKAYLSIGEYLRKAGAFKTVNVYYN+IISTHPSV LS++GD E VDE+AQGMI+AAQHGH+ETLRFLA KAQTG
Sbjct:    1 MVTPRGNPRPKAYLSIGEYLRKAGAFKTVNVYYNEIISTHPSVALSEDGDTEDVDELAQGMIEAAQHGHLETLRFLAGKAQTG 83
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BLAST of mRNA_H-paniculata_contig8636.16595.1 vs. uniprot
Match: A0A835YRB3_9STRA (AEX-3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB3_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.470e-22
Identity = 51/71 (71.83%), Postives = 57/71 (80.28%), Query Frame = 0 
Query:    6 GKPRPKAYLSIGEYLRKAGAFKTVNVYYNDIISTHPSVELSDNGDDEAVDEVAQGMIDAAQHGHVETLRFL 76
            G  + KAYLSI EYLRKAG FKTVNVYY +IISTHPS+  S+ GDDEA+DEVAQ MIDAA  G VE L+FL
Sbjct:   22 GGRKVKAYLSISEYLRKAGPFKTVNVYYRNIISTHPSLTHSETGDDEAIDEVAQRMIDAAMGGDVELLKFL 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8636.16595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSS9_ECTSI2.300e-3683.13UDENN domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YRB3_9STRA3.470e-2271.83AEX-3 domain-containing protein n=1 Tax=Tribonema ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8636contigH-paniculata_contig8636:2244..9601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8636.16595.1mRNA_H-paniculata_contig8636.16595.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8636 2097..9601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8636.16595.1 ID=prot_H-paniculata_contig8636.16595.1|Name=mRNA_H-paniculata_contig8636.16595.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
MSSSRGKPRPKAYLSIGEYLRKAGAFKTVNVYYNDIISTHPSVELSDNGD
DEAVDEVAQGMIDAAQHGHVETLRFLAAKAQTG
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