prot_H-paniculata_contig86.16560.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig86.16560.1
Unique Nameprot_H-paniculata_contig86.16560.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length242
Homology
BLAST of mRNA_H-paniculata_contig86.16560.1 vs. uniprot
Match: A0A7S4A5Q9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5Q9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.660e-23
Identity = 86/240 (35.83%), Postives = 121/240 (50.42%), Query Frame = 0
Query:    2 WKCLHDDPETSKLLKQIYGSSL-RPDIPYPKVRTIPRANLPPALKADGSTKDLV--RTGKSRKEVR--VPKFRGTKANGP-APIDSAIMRRKREFQIQDEVAINKEKMNH-YRPPYTKPIGDNEKASRLAEKFEFGGGKALPGEMTGPTMPIPSEERWKNAEKKRIAGVIRRRQGLPEAVHYAQEGSGAEKMPTTMFDQVADEIEERQQFLVEARASGVPFEGEDRVMAEISQRMSELKR 234
            W+      E  ++LK++YGSS   P+I YPK+ T PR  +P  +   G+  D    R+   R+E    V  +R   A     PID   + RKR     DE+  +    N  YRPP       + + +RL E  +FGGGKALP EMT     +PSE R +  E+ R+    R+R+GL E    A      + + T   +Q++ EIE+R  FL EA+A G+  E   RV  EIS R  EL+R
Sbjct:    7 WQAFDTSTEAGRMLKKLYGSSAGHPNIAYPKLTTKPRKQMPKFIPG-GAKLDATDARSNSHRREKASTVEPWRKKYARPTYKPID--FVARKRNTAAIDEILEDMSMRNAAYRPPRVNGSSTDAEKARLQEIAQFGGGKALPDEMTLGKTTLPSERRAQALEEARVEREWRKRRGLTE--EPAAAAPEPKSLETQQIEQISREIEDRAAFLEEAKAMGLKGEPIKRVEFEISTRKHELER 241          
BLAST of mRNA_H-paniculata_contig86.16560.1 vs. uniprot
Match: A0A7S2W819_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W819_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.310e-23
Identity = 86/252 (34.13%), Postives = 122/252 (48.41%), Query Frame = 0
Query:    2 WKCLHDDPETSKLLKQIYGSSLRPDIPYPKVRTIPRANLPPALKADGSTKDLVRTGK-----------SRKEVRVPKFRGTKANGPAPIDSAIMRRKREFQIQDEVAINKEKMNHYRPPYTKPIGDNEKASRLAEKFEFGGGKALPGEMTG-PTMPIPSEERWKNAEKKRIAGVIRRRQGLPEAVHYAQEGSGAEKMPTTMFDQ-VADEIEERQQFLVEARASGVPFEGEDRVMAEISQRMSELKRFTPPSA 240
            WK      E  +LL+QIYGS      P P    +PR +  P    +G      R G+             K V++P+ R       + ID  + RRKR   I+DE+   K +M HYRPP+ +P+G  +   RLAE   F GGK LP EMT  P    PSE+  +  E++RI    RRR GLPE          A K  T M ++ + DEI+ER++ L + +  G+  E    +  EI+ R+ EL++  P  A
Sbjct:   23 WKAFDTSSEAGRLLRQIYGSK-----PPPVNVPLPRRSRNPGPPTEGWRPVSNRVGQVDPRRSTRSIDKEKAVQIPR-RARADRSYSKID-LVSRRKRGDVIRDELQDAKMRMEHYRPPHLRPMGQEK--DRLAEICAFKGGKILPAEMTAIPLEVTPSEQVARIKERERIEKARRRRAGLPEPTLTRP---SAPKSHTQMLEETILDEIDERRKHLEDMQGLGMRAEDAKTLAGEIAVRVRELRKVNPELA 262          
BLAST of mRNA_H-paniculata_contig86.16560.1 vs. uniprot
Match: A0A7S4MSU8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSU8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 6.700e-18
Identity = 84/260 (32.31%), Postives = 120/260 (46.15%), Query Frame = 0
Query:    2 WKCLHDDPETSKLLKQIYGSSL--RPDIPYPKVRTIPRANLPPA-LKADGSTK-DLVRTGKSRKE---VRVPKFRGTKANGP-APIDSAIMRRKREFQIQDEVAINKEKMNHYRPPYTKPIGDNEKASRLAEKFEFGGGKALPGEMTGPTMPIPSEERWKNAEKKRIAGV-----IRRRQGLPEAVHYAQEGSG------AEKMPTT-----MFDQVADEIEERQ--QFLVEARASGVPFEGEDRVMAEISQRMSELKRF 235
            W+    D E  +LL ++YG     +P I YPK++T    +   A  K+ G  + D  R G  R+    V VPK       G  A   + I RRK E    +++A  +   + +RPP       + +  RL E F +GGG ALP E+T P  P+PSEE+ +  E +R+         RR +G  E      + S       +E M        MFDQV  EIEER+  QF +E  +SG     +  +  EIS RM EL + 
Sbjct:   21 WRVFQHDTEAGRLLSRLYGVQPGGKPQINYPKLKTRKSCSTERAHWKSPGQGEVDRKRAGFDRRRAASVSVPKVGSAVRRGETASAVTFIPRRKNEVACHEDLACIESVRHTFRPPNRSEYSTDREKDRLNELFTYGGGVALPEELTLPEAPLPSEEKHRRVEARRVEKAKCRRQARRNRGSKEDEDDLSDDSSLSNSRESEAMSDKGHNDRMFDQVLGEIEERRMFQFSMEEASSGALTRAQ--IADEISSRMKELVKL 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig86.16560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S4A5Q9_9STRA1.660e-2335.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2W819_9STRA4.310e-2334.13Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S4MSU8_9STRA6.700e-1832.31Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007914Uncharacterised protein family UPF0193PFAMPF05250UPF0193coord: 82..235
e-value: 8.6E-7
score: 29.0
IPR007914Uncharacterised protein family UPF0193PANTHERPTHR28348FAMILY NOT NAMEDcoord: 60..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig86contigH-paniculata_contig86:42837..52901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig86.16560.1mRNA_H-paniculata_contig86.16560.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig86 42837..53029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig86.16560.1 ID=prot_H-paniculata_contig86.16560.1|Name=mRNA_H-paniculata_contig86.16560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=242bp
MWKCLHDDPETSKLLKQIYGSSLRPDIPYPKVRTIPRANLPPALKADGST
KDLVRTGKSRKEVRVPKFRGTKANGPAPIDSAIMRRKREFQIQDEVAINK
EKMNHYRPPYTKPIGDNEKASRLAEKFEFGGGKALPGEMTGPTMPIPSEE
RWKNAEKKRIAGVIRRRQGLPEAVHYAQEGSGAEKMPTTMFDQVADEIEE
RQQFLVEARASGVPFEGEDRVMAEISQRMSELKRFTPPSAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007914UPF0193