prot_H-paniculata_contig86.16559.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig86.16559.1
Unique Nameprot_H-paniculata_contig86.16559.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length360
Homology
BLAST of mRNA_H-paniculata_contig86.16559.1 vs. uniprot
Match: A0A6H5JGH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGH3_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 1.360e-109
Identity = 178/359 (49.58%), Postives = 232/359 (64.62%), Query Frame = 0
Query:    4 KYEDNFLEPHGVPHNVIPSSIKDYANLPG--TETWCQMSEAVRVEGECSPSRMTPDFLPEASWDDIYAANASVLVVQSHNANPFGYLSANTNPDVVKRLDKLDADFHAGTFRLCAMRFLYRPRPEFRRNYCNERSSVVEGKFPSVSLHIRTGDSKLYRPERMDSLPQDLENFMACGTGFDEGLAAIMANSSSDEVGDVDFANV-----DTVWLLGTDSDDVIDLLNQGNHTVDFGGKVAFIEGGDDHRAHSGSKGGSATNE-GPLMDLAMLSESVLLVGSYHSSFTLHVAEIGGLPPAVRLTIWTPFSKIFGQRESVDMPPAVHFEDYRQGCRDFVVNPILRQEIMAAVHASREPFIDC 354
            K+EDNFLE  GVP ++ PSS++ Y +     TE WCQM  A  V+  C  SRMTPDFL  A WD+IYA +  V+VVQSHN NP   L  N  P V + L KL+ D     F  CA+RFL +PRPEF+  YC ERS+V+  K  S+SLH+RTGD+  Y PE   +LP DLENF AC TG +EGLA + A  ++    D D  +      D +W+LGTDS ++I+LL +G +TV  GGKVAF+EG   HR+HSG+KGG  +N  GPL+DLA+LSE+ L VGSY S+F+ + AEIGGLP  +RL + TPF  + G    VD      F+D+RQGCRD V +P  R+ +  A+  + EP+I C
Sbjct:  239 KFEDNFLEAGGVPWDIFPSSLEGYDSGSNFKTEIWCQMPNAFGVKTPCDKSRMTPDFLGTADWDEIYAKDTQVVVVQSHNHNPMDMLRVNKKPSVARALGKLNVDVDPDVFGTCALRFLLKPRPEFKGRYCEERSAVLGNKTASISLHLRTGDNPNYHPEWYKTLPTDLENFTACATGLEEGLAMVAAMYAATPGPDFDIFSTFMERRDLIWVLGTDSSEIINLLTEGEYTVAQGGKVAFVEGNKFHRSHSGNKGGKGSNNAGPLIDLALLSEAPLFVGSYCSTFSQNTAEIGGLPVPLRLFLSTPFHHLLGGSH-VDWD---RFDDFRQGCRDIVSDPSSREHLRVALKTNLEPWIRC 593          
BLAST of mRNA_H-paniculata_contig86.16559.1 vs. uniprot
Match: D7FWR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR3_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 3.120e-102
Identity = 165/322 (51.24%), Postives = 208/322 (64.60%), Query Frame = 0
Query:   39 MSEAVRVEGECSPSRMTPDFLPEASWDDIYAANASVLVVQSHNANPFGYLSANTNPDVVKRLDKLDADFHAGTFRLCAMRFLYRPRPEFRRNYCNERSSVVEGKFPSVSLHIRTGDSKLYRPERMDSLPQDLENFMACGTGFDEGLAAIMANSSSDEVGDVDFANV-----DTVWLLGTDSDDVIDLLNQGNHTVDFGGKVAFIEGGDDHRAHSGSKGGSATNE-GPLMDLAMLSESVLLVGSYHSSFTLHVAEIGGLPPAVRLTIWTPFSKIFGQRESVDMPPAVHFEDYRQGCRDFVVNPILRQEIMAAVHASREPFIDC 354
            M  AV V+  C  SRMTPDFL  A WD+IYA +  V+VVQSHN NP   L  N  P V + L KL+       F  CA+RFL +PRP+F+  YC ERS+V+ GK  S+SLH+RTGD+  Y  E   +LP DLENF AC TG +EGLA + A  +     D D         D VWLLGTDS +VIDLL +G HTV  GGKVAF+EG + HR+HSG+KGG  +N  GPL+DLA+LSE+ LLVGSY S+F+ + AEIGGLP  +RL + TPF  + G R  VD      F+D+RQGCRD V +P  R+ +  A+  + EP+I C
Sbjct:    1 MPNAVGVKTPCDKSRMTPDFLGTADWDEIYANDTQVVVVQSHNHNPMDLLRVNKQPSVARALGKLNVGVDPDVFGTCALRFLLKPRPDFKERYCEERSAVLGGKTASISLHLRTGDNPSYHAEWYKTLPTDLENFTACATGLEEGLAMVAAMYAPTPGPDFDIFRTFKERGDLVWLLGTDSSEVIDLLKEGEHTVAQGGKVAFVEGDEFHRSHSGNKGGKGSNNAGPLIDLALLSEAPLLVGSYCSTFSQNTAEIGGLPVPLRLFLSTPFHHLLG-RSHVDWD---RFDDFRQGCRDIVSDPSAREHLRVALKTNLEPWIRC 318          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig86.16559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGH3_9PHAE1.360e-10949.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWR3_ECTSI3.120e-10251.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 128..297
e-value: 7.5E-6
score: 27.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig86contigH-paniculata_contig86:10257..23068 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig86.16559.1mRNA_H-paniculata_contig86.16559.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig86 9616..30944 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig86.16559.1 ID=prot_H-paniculata_contig86.16559.1|Name=mRNA_H-paniculata_contig86.16559.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=360bp
MTDKYEDNFLEPHGVPHNVIPSSIKDYANLPGTETWCQMSEAVRVEGECS
PSRMTPDFLPEASWDDIYAANASVLVVQSHNANPFGYLSANTNPDVVKRL
DKLDADFHAGTFRLCAMRFLYRPRPEFRRNYCNERSSVVEGKFPSVSLHI
RTGDSKLYRPERMDSLPQDLENFMACGTGFDEGLAAIMANSSSDEVGDVD
FANVDTVWLLGTDSDDVIDLLNQGNHTVDFGGKVAFIEGGDDHRAHSGSK
GGSATNEGPLMDLAMLSESVLLVGSYHSSFTLHVAEIGGLPPAVRLTIWT
PFSKIFGQRESVDMPPAVHFEDYRQGCRDFVVNPILRQEIMAAVHASREP
FIDCSSASE*
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