prot_H-paniculata_contig8597.16558.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8597.16558.1
Unique Nameprot_H-paniculata_contig8597.16558.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length414
Homology
BLAST of mRNA_H-paniculata_contig8597.16558.1 vs. uniprot
Match: A0A6H5JSK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK9_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 7.340e-43
Identity = 167/425 (39.29%), Postives = 203/425 (47.76%), Query Frame = 0
Query:    3 LPWPAGSGLLPSLYISAAGLMCATWQERLPYSIGAAIPTTMTASHNGDDXXXXXXXAGDDGEGVNDTEPAAIATVEPPQESRSACEETKPANGDDAVASGGGSDGSXXADAEPDGAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRDEVSNGLD-EKPVTSGSNEGVLAEAAGVPQTEAAAAGAQGRIEGGAGPE-RRSWLQVGSVLGTDNLYLRNAAYLIEVQGLLSDVLRAALKELEELREQGETEDMVFSSSVG-DQARIARLRYATLTLDLANQLMSTVHMEGGAANVVVFLVEGAARAGARNMGYAVGTGGGSIGGTXXXXXXXXLSSTNRRSG--------------YFVETVDYVATKAKAGLERAREAQRXXXXXXXXXXXXXXXXXXXGRRELVEREEACLTLLQGLSGF 410
            LPWPAGSGLL S+YI+AAG +CA WQERLPYS+GAA             XX     AGD G      E A  A   PP    +   E   A  DD  +   G DGS  +   P                                        EV  G D E  V +G                +AA    G   GGAGPE ++SWL VG VLG D+LYLR++AYL EV+GLL DV+ A L+EL+EL EQGE E    ++ +G D  R ARLRY  L+L+LANQL+S V MEGGAA+VV +L+E AARAGAR+     G GG      XXXXXXXX+      +G              YF  TV +V+  A   L    + +                       E  E+EEACL+LLQGLSGF
Sbjct:  957 LPWPAGSGLLASVYITAAGTLCAMWQERLPYSVGAAAAXXXXXXXXXX-XXVEGVKAGDGG--GTGAETAVEAPSRPPLLEGAGANEG--AGVDDTASRSPGEDGSGSSGGSPA---------------------------------------EVEGGQDGEGDVDAGE--------------ASAAVPVHGAEGGGAGPEEKKSWLDVGGVLGNDDLYLRSSAYLEEVRGLLGDVVMATLRELQELCEQGEAE---MATIIGNDHTRTARLRYICLSLELANQLVSNVKMEGGAASVVTYLIEAAARAGARDS----GVGGAXXXXXXXXXXXXXILRKGAVTGXXXXXXXXXXXXXVYFDSTVAFVSGVANRRLSLLADLKCDSV-------------------EAEEQEEACLSLLQGLSGF 1297          
BLAST of mRNA_H-paniculata_contig8597.16558.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.540e-36
Identity = 147/420 (35.00%), Postives = 178/420 (42.38%), Query Frame = 0
Query:    2 RLPWPAGSGLLPSLYISAAGLMCATWQERLPYSIGAAIPTTMTASHNGDDXXXXXXXAGDDGEGVNDTEPAAIATVEPPQESRSACEETKPANGDDAVASGGGSDGSXXADAEPDGAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRDEVSNGLDEKPVTSGSNEGVLAEAAGVPQTEAAAAGAQGRIEGGAGPE-RRSWLQVGSVLGTDNLYLRNAAYLIEVQGLLSDVLRAALKELEELREQGETEDMVFSSSVGDQ-ARIARLRYATLTLDLANQLMSTVHMEGGAANVVVFLVEGAARAGARNMGYAVGTGGGSIGGTXXXXXXXXLSSTNRRSG---------YFVETVDYVATKAKAGLERAREAQRXXXXXXXXXXXXXXXXXXXGRRELVEREEACLTLLQGLSGF 410
            RLPWPAGSGLL S+YI+AAG +CA WQERLPYS+G         +  G          GDD EG             P                                                                                                AEA+       AA    G   GGAGPE ++SWL VG VLG D+LYLRN+AYL EV+GLL DV+ A L+ELEEL EQGE E    ++ +GD   R ARLRY  L+L+LANQL+S V MEGGAA+VV +L+E AARAGAR      G GG      XXXXX   +      +G         YF  TV +V+  A   L    + +                       E  ++EEACL+LLQGLSGF
Sbjct: 1211 RLPWPAGSGLLASVYITAAGTLCAMWQERLPYSVGGXXXXXXXXAR-GVSSQGDGPDHGDDDEGNPGKXXXXXXXXXP---------------------------------------------------------------------------------XXXXXXXXXXXXXXAAEAS-------AAVTVHGAEGGGAGPEEKKSWLDVGGVLGNDDLYLRNSAYLEEVRGLLGDVVMATLRELEELCEQGEAE---MATIIGDDHTRTARLRYICLSLELANQLVSNVKMEGGAASVVTYLIEAAARAGARES----GVGGXXXXXXXXXXXSGGILRKGAGTGDXXXXXAAVYFDSTVAFVSGVANRRLSLLADLKSDSV-------------------EAEKQEEACLSLLQGLSGF 1515          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8597.16558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSK9_9PHAE7.340e-4339.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLV5_ECTSI1.540e-3635.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 234..254
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8597contigH-paniculata_contig8597:7482..10161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8597.16558.1mRNA_H-paniculata_contig8597.16558.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8597 6752..10291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8597.16558.1 ID=prot_H-paniculata_contig8597.16558.1|Name=mRNA_H-paniculata_contig8597.16558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=414bp
MRLPWPAGSGLLPSLYISAAGLMCATWQERLPYSIGAAIPTTMTASHNGD
DNDDDDDDAGDDGEGVNDTEPAAIATVEPPQESRSACEETKPANGDDAVA
SGGGSDGSGGADAEPDGAAVAGSAALGASTSGSSSRSGGDGDGGGGTDRG
GGDRDEVSNGLDEKPVTSGSNEGVLAEAAGVPQTEAAAAGAQGRIEGGAG
PERRSWLQVGSVLGTDNLYLRNAAYLIEVQGLLSDVLRAALKELEELREQ
GETEDMVFSSSVGDQARIARLRYATLTLDLANQLMSTVHMEGGAANVVVF
LVEGAARAGARNMGYAVGTGGGSIGGTTGGGRSSGLSSTNRRSGYFVETV
DYVATKAKAGLERAREAQRQSVSVGQGGGGASGNSRSRGRRELVEREEAC
LTLLQGLSGFTRC*
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