prot_H-paniculata_contig8597.16557.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8597.16557.1
Unique Nameprot_H-paniculata_contig8597.16557.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length84
Homology
BLAST of mRNA_H-paniculata_contig8597.16557.1 vs. uniprot
Match: A0A6H5JEY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY4_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 6.980e-26
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0
Query:   18 SLDEWARVQRGLLRLENDAEKMQVADAIAQLSAQECMERGISLVPLAVQSVTTGLYGRACLSVGDPK 84
            S++EWARVQR LLRLE D E  QVA  + QL+AQECMERG+SLVPLAV  ++TGLYGRAC+SVGDPK
Sbjct:   17 SINEWARVQRKLLRLERDEEVEQVAGMLNQLTAQECMERGVSLVPLAVTGLSTGLYGRACVSVGDPK 83          
BLAST of mRNA_H-paniculata_contig8597.16557.1 vs. uniprot
Match: D7G8K5_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K5_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 2.200e-23
Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 0
Query:   18 SLDEWARVQRGLLRLENDAEKMQVADAIAQLSAQECMERGISLVPLAVQSVTTGLYGRACLSVGDPK 84
            S++EWARVQR LLRLE D E  QVA  I QL+AQECMERG+SLVPLAV  ++TGLYGRAC+SVGDPK
Sbjct:   17 SINEWARVQRKLLRLERDEEVEQVAGMINQLTAQECMERGVSLVPLAVTGLSTGLYGRACVSVGDPK 83          
BLAST of mRNA_H-paniculata_contig8597.16557.1 vs. uniprot
Match: A0A835Z7I8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.640e-13
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 0
Query:   19 LDEWARVQRGLLRLENDAEKMQVADAIAQLSAQECMERGISLVPLAVQSVTTGLYGRACLSVGDPK 84
            L+ W R QR LL  E  AE+ ++AD++AQLSA EC  +G+S++ L V+ VTTGL+GR  ++VGD K
Sbjct:    3 LEAWTRKQRELLNQERAAERAEIADSLAQLSAAECQAKGLSVLSLVVKEVTTGLFGRCVVTVGDTK 68          
BLAST of mRNA_H-paniculata_contig8597.16557.1 vs. uniprot
Match: W7TRN4_9STRA (Dna-binding protein smubp-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRN4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.960e-12
Identity = 31/70 (44.29%), Postives = 48/70 (68.57%), Query Frame = 0
Query:   12 AMCDTSSLDEWARVQRGLLRLENDAEKMQVADAIAQLSAQECMERGISLVPLAVQSVTTGLYGRACLSVG 81
            A     S+++WA  QR  L+ E +AE+ +V  A+AQL+ QEC E+G+SL+ L +  ++TGLY R C+S+G
Sbjct:    9 AFSSLPSIEKWATQQRAALKEEREAERQEVTAALAQLTPQECQEKGVSLLHLNIAGISTGLYARKCISLG 78          
BLAST of mRNA_H-paniculata_contig8597.16557.1 vs. uniprot
Match: A0A4D9CVU4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVU4_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.740e-12
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   12 AMCDTSSLDEWARVQRGLLRLENDAEKMQVADAIAQLSAQECMERGISLVPLAVQSVTTGLYGRACLSVG 81
            A     S++ WA  QR  L+ E +AE+ +V  A+AQL+ QEC E+G+SL+ L +  ++TGLY R C+S+G
Sbjct:  452 AFSSLPSIENWATQQRAALKEEREAERQEVTAALAQLTPQECQEKGVSLLHLNIAGISTGLYARKCISLG 521          
BLAST of mRNA_H-paniculata_contig8597.16557.1 vs. uniprot
Match: C5LR33_PERM5 (DNA-binding protein SMUBP-2, putative n=3 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LR33_PERM5)

HSP 1 Score: 49.3 bits (116), Expect = 7.810e-5
Identity = 24/66 (36.36%), Postives = 39/66 (59.09%), Query Frame = 0
Query:   18 SLDEWARVQRGLLRLENDAEKMQVADAIAQLSAQECMERGISLVPLAVQSVTTGLYGRACLSVGDP 83
            +++ +  +QR LL +E D E  Q  + +   S  +  +RGI L+ L + +V+TG YGRA L+ G P
Sbjct:   11 TVESFVELQRKLLVMERDEEVAQTTEVLRSYSNADLQDRGIVLLKLLLDTVSTGPYGRALLTFGKP 76          
BLAST of mRNA_H-paniculata_contig8597.16557.1 vs. uniprot
Match: A0A7J6KXB0_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6KXB0_PEROL)

HSP 1 Score: 49.3 bits (116), Expect = 7.850e-5
Identity = 24/66 (36.36%), Postives = 38/66 (57.58%), Query Frame = 0
Query:   18 SLDEWARVQRGLLRLENDAEKMQVADAIAQLSAQECMERGISLVPLAVQSVTTGLYGRACLSVGDP 83
            S++ +  +QR LL LE D E  Q  + +   +  E  +RG+ ++ L + SV+TG YGRA L+   P
Sbjct:   11 SVESFVELQRNLLTLERDEEVSQTTEVLRSYANAELQDRGVVILKLILDSVSTGPYGRALLTFVKP 76          
BLAST of mRNA_H-paniculata_contig8597.16557.1 vs. uniprot
Match: A0A7J6L6S4_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6L6S4_PEROL)

HSP 1 Score: 49.3 bits (116), Expect = 7.930e-5
Identity = 24/66 (36.36%), Postives = 38/66 (57.58%), Query Frame = 0
Query:   18 SLDEWARVQRGLLRLENDAEKMQVADAIAQLSAQECMERGISLVPLAVQSVTTGLYGRACLSVGDP 83
            S++ +  +QR LL LE D E  Q  + +   +  E  +RG+ ++ L + SV+TG YGRA L+   P
Sbjct:   11 SVESFVELQRNLLTLERDEEVSQTTEVLRSYANAELQDRGVVILKLILDSVSTGPYGRALLTFVKP 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8597.16557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JEY4_9PHAE6.980e-2673.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8K5_ECTSI2.200e-2374.63R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z7I8_9STRA1.640e-1351.52P-loop containing nucleoside triphosphate hydrolas... [more]
W7TRN4_9STRA1.960e-1244.29Dna-binding protein smubp-2 n=1 Tax=Nannochloropsi... [more]
A0A4D9CVU4_9STRA2.740e-1244.29Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
C5LR33_PERM57.810e-536.36DNA-binding protein SMUBP-2, putative n=3 Tax=Perk... [more]
A0A7J6KXB0_PEROL7.850e-536.36Uncharacterized protein n=2 Tax=Perkinsus olseni T... [more]
A0A7J6L6S4_PEROL7.930e-536.36Uncharacterized protein n=2 Tax=Perkinsus olseni T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 26..44
e-value: 6.4E-6
score: 27.4
NoneNo IPR availableGENE3D2.40.30.270coord: 45..80
e-value: 6.4E-6
score: 27.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8597contigH-paniculata_contig8597:634..5560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8597.16557.1mRNA_H-paniculata_contig8597.16557.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8597 634..5560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8597.16557.1 ID=prot_H-paniculata_contig8597.16557.1|Name=mRNA_H-paniculata_contig8597.16557.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=84bp
APELHRHTYSLAMCDTSSLDEWARVQRGLLRLENDAEKMQVADAIAQLSA
QECMERGISLVPLAVQSVTTGLYGRACLSVGDPK
back to top