prot_H-paniculata_contig8588.16547.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8588.16547.1
Unique Nameprot_H-paniculata_contig8588.16547.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length137
Homology
BLAST of mRNA_H-paniculata_contig8588.16547.1 vs. uniprot
Match: A0A6H5KWK7_9PHAE (ELMO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK7_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 2.790e-56
Identity = 92/135 (68.15%), Postives = 109/135 (80.74%), Query Frame = 0
Query:    1 MLALKSMVYFCKQYGGKASSLCRAQASKSASSSYPWAVVANNITLMLAEVLELRDNRFVSSRRGYWGAFDRRGAYFEIFCLAFIQLDETWTSRRATRDQFGKIIGYTKGCIQDVLETDPPNLQAFMAQAAEMGMM 135
            +LALKSMV+FC++Y  KA SLCRAQ S   SS YPWAVVANN+TLMLA+VLE+R N+F SSR+GYWG FDRRGA+FEIFC+AF  LD TW  R A R  FG+IIGYTK  I ++LE++PPNL AFM QA EMGM+
Sbjct:  226 VLALKSMVFFCQEYDRKALSLCRAQ-SVGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGML 359          
BLAST of mRNA_H-paniculata_contig8588.16547.1 vs. uniprot
Match: D8LB26_ECTSI (ELMO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB26_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 8.300e-55
Identity = 92/135 (68.15%), Postives = 109/135 (80.74%), Query Frame = 0
Query:    1 MLALKSMVYFCKQYGGKASSLCRAQASKSASSSYPWAVVANNITLMLAEVLELRDNRFVSSRRGYWGAFDRRGAYFEIFCLAFIQLDETWTSRRATRDQFGKIIGYTKGCIQDVLETDPPNLQAFMAQAAEMGMM 135
            +LALKSMV+FC++Y  KA SLCRAQ S   SS YPWAVVANN+TLMLA+VLE+R N+F SSR+GYWG FDRRGA+FEIFC+AF  LD TW  R A R  FG+IIGYTK  I ++LE++PPNL AFM QA EMGM+
Sbjct:  394 VLALKSMVFFCQEYDRKALSLCRAQ-SAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGML 527          
BLAST of mRNA_H-paniculata_contig8588.16547.1 vs. uniprot
Match: A0A835YT59_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT59_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 6.330e-19
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 0
Query:    2 LALKSMVYFCKQYGGKASSLCRAQASKSASSSYPWAVVANNITLMLAEVLELRDNRFVSSRRGYWGAFDRRGAYFEIFCLAFIQLDETWTSRRATRDQFGKIIGYTKGCIQDVLETDPPNLQAFMAQAAE 131
            L L+ MV         A +L RA A+++    YP+AVVA N+TLMLA+VL L    +  +R  YWG F+R  A+ ++FC AF +LD  W  R A+RD FG+            L + P  + AF+ +AA+
Sbjct:  393 LCLRCMVTLLSS--ADAPALLRANAARAPPRRYPFAVVARNVTLMLADVLRLGGRGYCEARASYWGLFERADAFEQLFCWAFRRLDAVWAERNASRDAFGQXXXXXXXXXXXALGSGPETVAAFLERAAQ 520          
BLAST of mRNA_H-paniculata_contig8588.16547.1 vs. uniprot
Match: A0A7S2RLL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLL0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 9.050e-19
Identity = 53/139 (38.13%), Postives = 77/139 (55.40%), Query Frame = 0
Query:    1 MLALKSMVYFCKQYGGKASSLCRAQASKSASSSYPWAVVANNITLMLAEVLELRDNRFVSSRRGYWGAFDR-----RGAYFEIFCLAFIQLDETWTSRRATRDQFGKIIGYTKGCIQDVLETDPPNLQAFMAQAAEMGM 134
            +LA+ S+ YF   Y  KA S+  AQ   +  + YP  VVA N+T+ML +VL LR  +F SS R +W  F+R        + E+F LAF  +D  W  R ATR  FG I+  TK  + ++L+  P +L   M +A + G+
Sbjct:  296 VLAVHSLAYFADTYQHKAISMFEAQRPNT-DNHYPVGVVAVNLTMMLTDVLGLRQGKFSSSPRTFWQLFERPDPQDMAPFCEVFSLAFRVIDREWADRNATRKDFGPIMASTKQTVVELLDQGPASLDELMDRAIKAGV 433          
BLAST of mRNA_H-paniculata_contig8588.16547.1 vs. uniprot
Match: A0A6G0WM47_9STRA (ELMO domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM47_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.710e-18
Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 0
Query:    1 MLALKSMVYFCKQYGGKASSLCRAQASKSASSSYPWAVVANNITLMLAEVLELRDNRFVSSRRGYWGAFDRRGAYFEIFCLAFIQLDETWTSRRATRDQFGKIIGYTKGCIQDVLETDPPNLQAFMAQAAEM 132
            +LALK +VY C  +  K + L R Q  ++    YP  V   NIT MLA +L+L D  F SS   YW  F    A+FE++ LA I++D+ W    AT  QFG+++  TK  I+ VL   P N+  F++ A ++
Sbjct:  256 LLALKCLVYVCNMHPEKMNFLFRDQMPETNKRWYPVCVAGINITCMLAGLLKLGDGSFASSVTPYWPLFSEPDAFFELYYLAMIKMDQIWHRSHATYMQFGEVLHSTKTLIRYVLAQGPKNMDEFVSIADQI 387          
BLAST of mRNA_H-paniculata_contig8588.16547.1 vs. uniprot
Match: W4G4B3_9STRA (ELMO domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4B3_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.020e-15
Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 0
Query:    1 MLALKSMVYFCKQYGGKASSLCRAQASKSASSSYPWAVVANNITLMLAEVLELRDNRFVSSRRGYWGAFDRRGAYFEIFCLAFIQLDETWTSRRATRDQFGKIIGYTKGCIQDVLETDPPNLQAFMAQAAE 131
            +LALK +VY C  +  K   L R Q  +     YP +V   N+T +LA +L+L D  F+S+   YW  FD   A+FE++ L  +++D+ W    AT  +FG+++  TK  ++ VL   P +  A  A   E
Sbjct:  268 LLALKCLVYACNMHPEKMLFLFRDQKPEPGKRWYPVSVAGINLTCLLAGLLKLGDGSFISTEAAYWPLFDEPNAFFEMYYLVLLKMDQIWHRSHATYMEFGEVLRATKTLVRYVLSRSPMHSLADFACTLE 398          
BLAST of mRNA_H-paniculata_contig8588.16547.1 vs. uniprot
Match: A0A024TKR2_9STRA (ELMO domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKR2_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 8.230e-14
Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 0
Query:    1 MLALKSMVYFCKQYGGKASSLCRAQASKSASSSYPWAVVANNITLMLAEVLELRDNRFVSSRRGYWGAFDRRGAYFEIFCLAFIQLDETWTSRRATRDQFGKIIGYTKGCIQDVLETDP 119
            +LALK +VY C  +  K   L R Q  +     YP  V   N+T +LA + +L D  F+S+   YW  F    A+FEI+ L  +++D+ W    AT  +FG ++  TK  ++  L   P
Sbjct:  265 LLALKCLVYVCHMHADKMVFLFRDQKPEPGKRWYPVCVAGINLTCLLAGLFKLGDGSFISTEAPYWPLFTEPNAFFEIYYLVLVKMDQIWHRSHATYMEFGDVLNATKKLVRYALAQSP 383          
BLAST of mRNA_H-paniculata_contig8588.16547.1 vs. uniprot
Match: A0A485KZF2_9STRA (Aste57867_13129 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZF2_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.880e-13
Identity = 40/119 (33.61%), Postives = 62/119 (52.10%), Query Frame = 0
Query:    1 MLALKSMVYFCKQYGGKASSLCRAQASKSASSSYPWAVVANNITLMLAEVLELRDNRFVSSRRGYWGAFDRRGAYFEIFCLAFIQLDETWTSRRATRDQFGKIIGYTKGCIQDVLETDP 119
            +LALK +VY C  +  K   + + Q        YP AV   N+T MLA +L L D  + ++   YW  F    A+FE++ +A +++D+ W    AT  QFG ++  TK  ++ VL   P
Sbjct:  273 LLALKCLVYVCHMHPEKTRFIFQDQKPAPGKRWYPVAVAGINLTCMLAGLLTLGDGSYATTEAPYWSLFAEPNAFFELYFVALVKMDQIWHRSHATYMQFGDVLAATKTLLRYVLAQGP 391          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8588.16547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KWK7_9PHAE2.790e-5668.15ELMO domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LB26_ECTSI8.300e-5568.15ELMO domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YT59_9STRA6.330e-1938.46ELMO/CED-12 family-domain-containing protein n=1 T... [more]
A0A7S2RLL0_9STRA9.050e-1938.13Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6G0WM47_9STRA1.710e-1838.64ELMO domain-containing protein n=1 Tax=Aphanomyces... [more]
W4G4B3_9STRA1.020e-1534.35ELMO domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A024TKR2_9STRA8.230e-1433.61ELMO domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A485KZF2_9STRA2.880e-1333.61Aste57867_13129 protein n=1 Tax=Aphanomyces stella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006816ELMO domainPFAMPF04727ELMO_CED12coord: 1..103
e-value: 4.4E-18
score: 66.0
IPR006816ELMO domainPROSITEPS51335ELMOcoord: 1..115
score: 11.239
NoneNo IPR availablePANTHERPTHR12771ENGULFMENT AND CELL MOTILITYcoord: 1..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8588contigH-paniculata_contig8588:3570..9084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8588.16547.1mRNA_H-paniculata_contig8588.16547.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8588 247..10107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8588.16547.1 ID=prot_H-paniculata_contig8588.16547.1|Name=mRNA_H-paniculata_contig8588.16547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
MLALKSMVYFCKQYGGKASSLCRAQASKSASSSYPWAVVANNITLMLAEV
LELRDNRFVSSRRGYWGAFDRRGAYFEIFCLAFIQLDETWTSRRATRDQF
GKIIGYTKGCIQDVLETDPPNLQAFMAQAAEMGMMV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006816ELMO_dom